Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc116Q80X53 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc116Q80X53 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc116Q80X53 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Cap2-205ENSMUST00000225824 1634 ntBASIC20.72■□□□□ 0.91
Ccdc116Q80X53 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc116Q80X53 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc116Q80X53 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc116Q80X53 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc116Q80X53 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc116Q80X53 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc116Q80X53 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc116Q80X53 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc116Q80X53 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc116Q80X53 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc116Q80X53 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc116Q80X53 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc116Q80X53 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Ccdc116Q80X53 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc116Q80X53 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc116Q80X53 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc116Q80X53 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc116Q80X53 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ccdc116Q80X53 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc116Q80X53 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc116Q80X53 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccdc116Q80X53 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms