Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.02■■□□□ 1.12
Prpf38bQ80SY5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Prpf38bQ80SY5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Prpf38bQ80SY5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Prpf38bQ80SY5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf38bQ80SY5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22■■□□□ 1.11
Prpf38bQ80SY5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Prpf38bQ80SY5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22■■□□□ 1.11
Prpf38bQ80SY5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Prpf38bQ80SY5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22■■□□□ 1.11
Prpf38bQ80SY5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf38bQ80SY5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf38bQ80SY5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf38bQ80SY5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf38bQ80SY5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf38bQ80SY5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Prpf38bQ80SY5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf38bQ80SY5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf38bQ80SY5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Prpf38bQ80SY5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Prpf38bQ80SY5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Gm29257-201ENSMUST00000186115 639 ntBASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
Prpf38bQ80SY5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38bQ80SY5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38bQ80SY5 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.94■■□□□ 1.1
Prpf38bQ80SY5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38bQ80SY5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.93■■□□□ 1.1
Prpf38bQ80SY5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38bQ80SY5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.91■■□□□ 1.1
Prpf38bQ80SY5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38bQ80SY5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Prpf38bQ80SY5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Prpf38bQ80SY5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38bQ80SY5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38bQ80SY5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38bQ80SY5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms