Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssx9Q6XAS3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssx9Q6XAS3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ssx9Q6XAS3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssx9Q6XAS3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ssx9Q6XAS3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssx9Q6XAS3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.03■□□□□ 0.96
Ssx9Q6XAS3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssx9Q6XAS3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssx9Q6XAS3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ssx9Q6XAS3 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.01■□□□□ 0.95
Ssx9Q6XAS3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ssx9Q6XAS3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssx9Q6XAS3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ssx9Q6XAS3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssx9Q6XAS3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssx9Q6XAS3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssx9Q6XAS3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
Ssx9Q6XAS3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssx9Q6XAS3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms