Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-1Q5R1I8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav3-1Q5R1I8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-1Q5R1I8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-1Q5R1I8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-1Q5R1I8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-1Q5R1I8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-1Q5R1I8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-1Q5R1I8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-1Q5R1I8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-1Q5R1I8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-1Q5R1I8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-1Q5R1I8 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.36□□□□□ -0.11
Trav3-1Q5R1I8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-1Q5R1I8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Trav3-1Q5R1I8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trav3-1Q5R1I8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-1Q5R1I8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav3-1Q5R1I8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-1Q5R1I8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 201.6 ms