Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
R3hdm4Q4VBF2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23■■□□□ 1.27
R3hdm4Q4VBF2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23■■□□□ 1.27
R3hdm4Q4VBF2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
R3hdm4Q4VBF2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm4Q4VBF2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm4Q4VBF2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm4Q4VBF2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm4Q4VBF2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
R3hdm4Q4VBF2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
R3hdm4Q4VBF2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.98■■□□□ 1.27
R3hdm4Q4VBF2 Gm10232-201ENSMUST00000089221 720 ntBASIC22.98■■□□□ 1.27
R3hdm4Q4VBF2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm4Q4VBF2 Gm15546-201ENSMUST00000122095 826 ntBASIC22.97■■□□□ 1.27
R3hdm4Q4VBF2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
R3hdm4Q4VBF2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
R3hdm4Q4VBF2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
R3hdm4Q4VBF2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
R3hdm4Q4VBF2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
R3hdm4Q4VBF2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
R3hdm4Q4VBF2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.95■■□□□ 1.26
R3hdm4Q4VBF2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
R3hdm4Q4VBF2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
R3hdm4Q4VBF2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
R3hdm4Q4VBF2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
R3hdm4Q4VBF2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
R3hdm4Q4VBF2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
R3hdm4Q4VBF2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
R3hdm4Q4VBF2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
R3hdm4Q4VBF2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
R3hdm4Q4VBF2 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.9■■□□□ 1.26
R3hdm4Q4VBF2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
R3hdm4Q4VBF2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
R3hdm4Q4VBF2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
R3hdm4Q4VBF2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
R3hdm4Q4VBF2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
R3hdm4Q4VBF2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
R3hdm4Q4VBF2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
R3hdm4Q4VBF2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.89■■□□□ 1.26
R3hdm4Q4VBF2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.89■■□□□ 1.25
R3hdm4Q4VBF2 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.89■■□□□ 1.25
R3hdm4Q4VBF2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
R3hdm4Q4VBF2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
R3hdm4Q4VBF2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
R3hdm4Q4VBF2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
R3hdm4Q4VBF2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
R3hdm4Q4VBF2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
R3hdm4Q4VBF2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
R3hdm4Q4VBF2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
R3hdm4Q4VBF2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
R3hdm4Q4VBF2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
R3hdm4Q4VBF2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
R3hdm4Q4VBF2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
R3hdm4Q4VBF2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
R3hdm4Q4VBF2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.84■■□□□ 1.25
R3hdm4Q4VBF2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.84■■□□□ 1.25
R3hdm4Q4VBF2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.84■■□□□ 1.25
R3hdm4Q4VBF2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms