Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lin28bQ45KJ6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin28bQ45KJ6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lin28bQ45KJ6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin28bQ45KJ6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin28bQ45KJ6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin28bQ45KJ6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lin28bQ45KJ6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lin28bQ45KJ6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin28bQ45KJ6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin28bQ45KJ6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lin28bQ45KJ6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lin28bQ45KJ6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lin28bQ45KJ6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.08■□□□□ 0.81
Lin28bQ45KJ6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.08■□□□□ 0.81
Lin28bQ45KJ6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lin28bQ45KJ6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lin28bQ45KJ6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Lin28bQ45KJ6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Lin28bQ45KJ6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin28bQ45KJ6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin28bQ45KJ6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Lin28bQ45KJ6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Lin28bQ45KJ6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms