Protein–RNA interactions for Protein: Q3V3Q7

Pacs2, Phosphofurin acidic cluster sorting protein 2, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs2Q3V3Q7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pacs2Q3V3Q7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pacs2Q3V3Q7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pacs2Q3V3Q7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pacs2Q3V3Q7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.67■□□□□ 0.9
Pacs2Q3V3Q7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.66■□□□□ 0.9
Pacs2Q3V3Q7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pacs2Q3V3Q7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pacs2Q3V3Q7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pacs2Q3V3Q7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pacs2Q3V3Q7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pacs2Q3V3Q7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pacs2Q3V3Q7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pacs2Q3V3Q7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pacs2Q3V3Q7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pacs2Q3V3Q7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pacs2Q3V3Q7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms