Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Carmil3Q3UFQ8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.79■■□□□ 1.72
Carmil3Q3UFQ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Gm12821-201ENSMUST00000120022 600 ntBASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Golgb1-201ENSMUST00000023534 498 ntBASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Carmil3Q3UFQ8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Carmil3Q3UFQ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.77■■□□□ 1.72
Carmil3Q3UFQ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
Carmil3Q3UFQ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Carmil3Q3UFQ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Carmil3Q3UFQ8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Gm27454-201ENSMUST00000185090 204 ntBASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Carmil3Q3UFQ8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Carmil3Q3UFQ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Carmil3Q3UFQ8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Carmil3Q3UFQ8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Carmil3Q3UFQ8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Carmil3Q3UFQ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Carmil3Q3UFQ8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Carmil3Q3UFQ8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Carmil3Q3UFQ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Carmil3Q3UFQ8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Carmil3Q3UFQ8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Carmil3Q3UFQ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.71■■□□□ 1.71
Carmil3Q3UFQ8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Carmil3Q3UFQ8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Carmil3Q3UFQ8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
Carmil3Q3UFQ8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Carmil3Q3UFQ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Carmil3Q3UFQ8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Carmil3Q3UFQ8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
Carmil3Q3UFQ8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Carmil3Q3UFQ8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.67■■□□□ 1.7
Carmil3Q3UFQ8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 Gm45417-201ENSMUST00000209533 758 ntBASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Carmil3Q3UFQ8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Carmil3Q3UFQ8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Carmil3Q3UFQ8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.64■■□□□ 1.69
Carmil3Q3UFQ8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Carmil3Q3UFQ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Carmil3Q3UFQ8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Carmil3Q3UFQ8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Carmil3Q3UFQ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms