Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.94■□□□□ 0.78
Brf2Q3UAW9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Brf2Q3UAW9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brf2Q3UAW9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brf2Q3UAW9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brf2Q3UAW9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Cap2-205ENSMUST00000225824 1634 ntBASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Brf2Q3UAW9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brf2Q3UAW9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Brf2Q3UAW9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brf2Q3UAW9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brf2Q3UAW9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Brf2Q3UAW9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.84■□□□□ 0.77
Brf2Q3UAW9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brf2Q3UAW9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms