Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Etf1-202ENSMUST00000180351 108 ntBASIC19.93■□□□□ 0.78
Nkx3-2P97503 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx3-2P97503 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.92■□□□□ 0.78
Nkx3-2P97503 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx3-2P97503 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.91■□□□□ 0.78
Nkx3-2P97503 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Nkx3-2P97503 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.91■□□□□ 0.78
Nkx3-2P97503 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx3-2P97503 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx3-2P97503 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.9■□□□□ 0.78
Nkx3-2P97503 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Nkx3-2P97503 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nkx3-2P97503 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx3-2P97503 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.88■□□□□ 0.77
Nkx3-2P97503 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx3-2P97503 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.87■□□□□ 0.77
Nkx3-2P97503 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.87■□□□□ 0.77
Nkx3-2P97503 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx3-2P97503 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Notumos-201ENSMUST00000151998 2659 ntBASIC19.86■□□□□ 0.77
Nkx3-2P97503 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Gm7417-201ENSMUST00000192950 473 ntBASIC19.86■□□□□ 0.77
Nkx3-2P97503 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx3-2P97503 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Gm40881-201ENSMUST00000223397 166 ntBASIC19.85■□□□□ 0.77
Nkx3-2P97503 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx3-2P97503 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx3-2P97503 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx3-2P97503 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx3-2P97503 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx3-2P97503 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx3-2P97503 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.83■□□□□ 0.77
Nkx3-2P97503 Gm10399-202ENSMUST00000202768 748 ntBASIC19.83■□□□□ 0.77
Nkx3-2P97503 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx3-2P97503 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Nkx3-2P97503 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx3-2P97503 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx3-2P97503 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx3-2P97503 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.82■□□□□ 0.76
Nkx3-2P97503 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms