Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm3P62311 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Lsm3P62311 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.27■□□□□ 0.68
Lsm3P62311 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm3P62311 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm3P62311 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm3P62311 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm3P62311 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm3P62311 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm3P62311 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lsm3P62311 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm3P62311 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.25■□□□□ 0.67
Lsm3P62311 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lsm3P62311 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm3P62311 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm3P62311 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm3P62311 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm3P62311 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Lsm3P62311 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm3P62311 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm3P62311 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Lsm3P62311 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm3P62311 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm3P62311 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lsm3P62311 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm3P62311 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm3P62311 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lsm3P62311 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm3P62311 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lsm3P62311 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm3P62311 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm3P62311 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.2■□□□□ 0.66
Lsm3P62311 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm3P62311 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm3P62311 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm3P62311 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm3P62311 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm3P62311 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm3P62311 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Lsm3P62311 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm3P62311 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lsm3P62311 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm3P62311 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm3P62311 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.18■□□□□ 0.66
Lsm3P62311 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lsm3P62311 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm3P62311 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Lsm3P62311 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lsm3P62311 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.17■□□□□ 0.66
Lsm3P62311 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lsm3P62311 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lsm3P62311 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm3P62311 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.17■□□□□ 0.66
Lsm3P62311 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.16■□□□□ 0.66
Lsm3P62311 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm3P62311 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.15■□□□□ 0.66
Lsm3P62311 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms