Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.79■□□□□ 0.44
Lhx4P53776 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.79■□□□□ 0.44
Lhx4P53776 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.79■□□□□ 0.44
Lhx4P53776 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx4P53776 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx4P53776 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx4P53776 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.78■□□□□ 0.44
Lhx4P53776 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx4P53776 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx4P53776 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Lhx4P53776 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx4P53776 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lhx4P53776 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx4P53776 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx4P53776 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lhx4P53776 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx4P53776 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx4P53776 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Lhx4P53776 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx4P53776 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
Lhx4P53776 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx4P53776 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx4P53776 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Lhx4P53776 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.75■□□□□ 0.43
Lhx4P53776 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.75■□□□□ 0.43
Lhx4P53776 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lhx4P53776 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx4P53776 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx4P53776 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx4P53776 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.74■□□□□ 0.43
Lhx4P53776 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lhx4P53776 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.74■□□□□ 0.43
Lhx4P53776 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Lhx4P53776 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx4P53776 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
Lhx4P53776 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lhx4P53776 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lhx4P53776 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx4P53776 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx4P53776 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx4P53776 Gm5812-201ENSMUST00000061073 957 ntBASIC17.73■□□□□ 0.43
Lhx4P53776 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Lhx4P53776 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lhx4P53776 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lhx4P53776 Gm45444-201ENSMUST00000211394 898 ntBASIC17.72■□□□□ 0.43
Lhx4P53776 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx4P53776 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.71■□□□□ 0.43
Lhx4P53776 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lhx4P53776 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx4P53776 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lhx4P53776 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lhx4P53776 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Lhx4P53776 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 Gm13238-201ENSMUST00000117655 780 ntBASIC17.7■□□□□ 0.42
Lhx4P53776 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx4P53776 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lhx4P53776 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms