Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sox2P48432 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox2P48432 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox2P48432 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox2P48432 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox2P48432 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox2P48432 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox2P48432 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox2P48432 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox2P48432 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Sox2P48432 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sox2P48432 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.76
Sox2P48432 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.77■□□□□ 0.76
Sox2P48432 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.77■□□□□ 0.76
Sox2P48432 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox2P48432 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sox2P48432 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Sox2P48432 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Sox2P48432 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Sox2P48432 Gm44428-201ENSMUST00000204474 874 ntBASIC19.76■□□□□ 0.75
Sox2P48432 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox2P48432 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Sox2P48432 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
Sox2P48432 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox2P48432 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox2P48432 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox2P48432 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox2P48432 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox2P48432 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sox2P48432 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.73■□□□□ 0.75
Sox2P48432 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox2P48432 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.72■□□□□ 0.75
Sox2P48432 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox2P48432 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox2P48432 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sox2P48432 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox2P48432 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sox2P48432 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.71■□□□□ 0.75
Sox2P48432 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox2P48432 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox2P48432 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.71■□□□□ 0.75
Sox2P48432 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox2P48432 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.7■□□□□ 0.74
Sox2P48432 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.7■□□□□ 0.74
Sox2P48432 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox2P48432 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox2P48432 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox2P48432 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox2P48432 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox2P48432 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox2P48432 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox2P48432 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox2P48432 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox2P48432 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox2P48432 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Sox2P48432 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.67■□□□□ 0.74
Sox2P48432 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox2P48432 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox2P48432 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox2P48432 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.66■□□□□ 0.74
Sox2P48432 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox2P48432 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox2P48432 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox2P48432 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
Sox2P48432 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox2P48432 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms