Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-6P43688 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-6P43688 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-6P43688 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.08■□□□□ 0.81
Nkx2-6P43688 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-6P43688 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-6P43688 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
Nkx2-6P43688 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.05■□□□□ 0.8
Nkx2-6P43688 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-6P43688 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.04■□□□□ 0.8
Nkx2-6P43688 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-6P43688 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-6P43688 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-6P43688 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.04■□□□□ 0.8
Nkx2-6P43688 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-6P43688 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-6P43688 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx2-6P43688 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-6P43688 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-6P43688 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nkx2-6P43688 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.02■□□□□ 0.8
Nkx2-6P43688 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-6P43688 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-6P43688 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-6P43688 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-6P43688 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Nkx2-6P43688 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.01■□□□□ 0.79
Nkx2-6P43688 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-6P43688 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-6P43688 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20■□□□□ 0.79
Nkx2-6P43688 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nkx2-6P43688 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-6P43688 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-6P43688 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-6P43688 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nkx2-6P43688 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.98■□□□□ 0.79
Nkx2-6P43688 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Gm21956-201ENSMUST00000179946 522 ntBASIC19.98■□□□□ 0.79
Nkx2-6P43688 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-6P43688 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-6P43688 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.96■□□□□ 0.79
Nkx2-6P43688 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.96■□□□□ 0.79
Nkx2-6P43688 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-6P43688 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Nkx2-6P43688 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms