Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd27P41272 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.07■□□□□ 0.32
Cd27P41272 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.07■□□□□ 0.32
Cd27P41272 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd27P41272 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd27P41272 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd27P41272 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd27P41272 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd27P41272 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd27P41272 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.06■□□□□ 0.32
Cd27P41272 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd27P41272 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd27P41272 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd27P41272 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd27P41272 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd27P41272 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd27P41272 Gm15039-201ENSMUST00000118914 875 ntBASIC17.05■□□□□ 0.32
Cd27P41272 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
Cd27P41272 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd27P41272 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.05■□□□□ 0.32
Cd27P41272 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cd27P41272 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cd27P41272 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd27P41272 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd27P41272 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.05■□□□□ 0.32
Cd27P41272 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd27P41272 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd27P41272 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd27P41272 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cd27P41272 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd27P41272 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd27P41272 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd27P41272 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cd27P41272 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd27P41272 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd27P41272 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd27P41272 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.03■□□□□ 0.32
Cd27P41272 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd27P41272 Gm5812-201ENSMUST00000061073 957 ntBASIC17.03■□□□□ 0.32
Cd27P41272 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cd27P41272 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.03■□□□□ 0.32
Cd27P41272 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.03■□□□□ 0.32
Cd27P41272 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd27P41272 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Cd27P41272 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd27P41272 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd27P41272 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd27P41272 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd27P41272 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd27P41272 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cd27P41272 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd27P41272 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17■□□□□ 0.31
Cd27P41272 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cd27P41272 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd27P41272 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd27P41272 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cd27P41272 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cd27P41272 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cd27P41272 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cd27P41272 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd27P41272 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cd27P41272 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd27P41272 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cd27P41272 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd27P41272 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd27P41272 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cd27P41272 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cd27P41272 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd27P41272 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd27P41272 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd27P41272 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cd27P41272 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.97■□□□□ 0.31
Cd27P41272 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.97■□□□□ 0.31
Cd27P41272 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.97■□□□□ 0.31
Cd27P41272 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cd27P41272 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cd27P41272 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd27P41272 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd27P41272 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd27P41272 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd27P41272 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cd27P41272 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cd27P41272 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd27P41272 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms