Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Kdm5cP41230 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Kdm5cP41230 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
Kdm5cP41230 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC31.62■■■□□ 2.65
Kdm5cP41230 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Kdm5cP41230 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Kdm5cP41230 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Kdm5cP41230 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Kdm5cP41230 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Kdm5cP41230 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC31.6■■■□□ 2.65
Kdm5cP41230 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
Kdm5cP41230 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Kdm5cP41230 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Kdm5cP41230 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 Gm43137-201ENSMUST00000198052 594 ntBASIC31.59■■■□□ 2.65
Kdm5cP41230 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm5cP41230 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Kdm5cP41230 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Kdm5cP41230 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Kdm5cP41230 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.65
Kdm5cP41230 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC31.57■■■□□ 2.64
Kdm5cP41230 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Kdm5cP41230 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm5cP41230 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm5cP41230 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Kdm5cP41230 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm5cP41230 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC31.56■■■□□ 2.64
Kdm5cP41230 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm5cP41230 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm5cP41230 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Kdm5cP41230 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm5cP41230 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Kdm5cP41230 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Kdm5cP41230 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.53■■■□□ 2.64
Kdm5cP41230 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC31.53■■■□□ 2.64
Kdm5cP41230 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Kdm5cP41230 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC31.53■■■□□ 2.64
Kdm5cP41230 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Kdm5cP41230 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Kdm5cP41230 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
Kdm5cP41230 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Kdm5cP41230 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Kdm5cP41230 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Kdm5cP41230 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Kdm5cP41230 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
Kdm5cP41230 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm5cP41230 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm5cP41230 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm5cP41230 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm5cP41230 Gm43173-201ENSMUST00000202246 593 ntBASIC31.51■■■□□ 2.63
Kdm5cP41230 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC31.51■■■□□ 2.63
Kdm5cP41230 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm5cP41230 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Kdm5cP41230 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Kdm5cP41230 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Kdm5cP41230 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
Kdm5cP41230 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Kdm5cP41230 Gm12251-201ENSMUST00000117893 792 ntBASIC31.49■■■□□ 2.63
Kdm5cP41230 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC31.49■■■□□ 2.63
Kdm5cP41230 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
Kdm5cP41230 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Kdm5cP41230 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Kdm5cP41230 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Kdm5cP41230 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
Kdm5cP41230 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Kdm5cP41230 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC31.47■■■□□ 2.63
Kdm5cP41230 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC31.47■■■□□ 2.63
Kdm5cP41230 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.47■■■□□ 2.63
Kdm5cP41230 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Kdm5cP41230 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Kdm5cP41230 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Kdm5cP41230 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Kdm5cP41230 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Kdm5cP41230 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC31.45■■■□□ 2.63
Kdm5cP41230 Krt8-ps-201ENSMUST00000208495 945 ntBASIC31.45■■■□□ 2.63
Kdm5cP41230 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Kdm5cP41230 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31.45■■■□□ 2.62
Kdm5cP41230 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kdm5cP41230 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Kdm5cP41230 Gm9870-201ENSMUST00000063874 645 ntBASIC31.44■■■□□ 2.62
Kdm5cP41230 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kdm5cP41230 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kdm5cP41230 Mir7075-201ENSMUST00000184187 82 ntBASIC31.43■■■□□ 2.62
Kdm5cP41230 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Kdm5cP41230 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC31.43■■■□□ 2.62
Kdm5cP41230 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Kdm5cP41230 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kdm5cP41230 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kdm5cP41230 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kdm5cP41230 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm5cP41230 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC31.41■■■□□ 2.62
Kdm5cP41230 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm5cP41230 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Kdm5cP41230 AC116713.1-201ENSMUST00000215074 430 ntBASIC31.4■■■□□ 2.62
Kdm5cP41230 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Kdm5cP41230 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC31.4■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms