Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.02■■□□□ 1.28
Pde6bP23440 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pde6bP23440 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pde6bP23440 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.02■■□□□ 1.28
Pde6bP23440 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pde6bP23440 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pde6bP23440 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pde6bP23440 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pde6bP23440 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pde6bP23440 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pde6bP23440 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pde6bP23440 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pde6bP23440 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pde6bP23440 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pde6bP23440 Gm12922-201ENSMUST00000120626 809 ntBASIC23■■□□□ 1.27
Pde6bP23440 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pde6bP23440 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pde6bP23440 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pde6bP23440 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pde6bP23440 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pde6bP23440 Gm21956-201ENSMUST00000179946 522 ntBASIC22.99■■□□□ 1.27
Pde6bP23440 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.99■■□□□ 1.27
Pde6bP23440 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pde6bP23440 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.98■■□□□ 1.27
Pde6bP23440 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pde6bP23440 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pde6bP23440 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pde6bP23440 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pde6bP23440 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.97■■□□□ 1.27
Pde6bP23440 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pde6bP23440 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Pde6bP23440 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pde6bP23440 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pde6bP23440 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pde6bP23440 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.96■■□□□ 1.27
Pde6bP23440 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.96■■□□□ 1.27
Pde6bP23440 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Pde6bP23440 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pde6bP23440 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pde6bP23440 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pde6bP23440 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.96■■□□□ 1.27
Pde6bP23440 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pde6bP23440 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.95■■□□□ 1.26
Pde6bP23440 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pde6bP23440 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pde6bP23440 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pde6bP23440 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pde6bP23440 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Pde6bP23440 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.94■■□□□ 1.26
Pde6bP23440 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
Pde6bP23440 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pde6bP23440 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pde6bP23440 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pde6bP23440 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.93■■□□□ 1.26
Pde6bP23440 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pde6bP23440 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Pde6bP23440 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.92■■□□□ 1.26
Pde6bP23440 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.92■■□□□ 1.26
Pde6bP23440 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.92■■□□□ 1.26
Pde6bP23440 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.92■■□□□ 1.26
Pde6bP23440 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pde6bP23440 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.91■■□□□ 1.26
Pde6bP23440 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Pde6bP23440 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.91■■□□□ 1.26
Pde6bP23440 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pde6bP23440 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pde6bP23440 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pde6bP23440 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pde6bP23440 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pde6bP23440 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.9■■□□□ 1.26
Pde6bP23440 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pde6bP23440 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pde6bP23440 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pde6bP23440 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.89■■□□□ 1.26
Pde6bP23440 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pde6bP23440 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pde6bP23440 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.88■■□□□ 1.25
Pde6bP23440 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pde6bP23440 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms