Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC31.47■■■□□ 2.63
NclP09405 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
NclP09405 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
NclP09405 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NclP09405 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NclP09405 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NclP09405 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
NclP09405 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
NclP09405 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NclP09405 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
NclP09405 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
NclP09405 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NclP09405 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NclP09405 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
NclP09405 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NclP09405 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NclP09405 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC31.44■■■□□ 2.62
NclP09405 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NclP09405 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
NclP09405 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.43■■■□□ 2.62
NclP09405 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
NclP09405 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NclP09405 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
NclP09405 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.42■■■□□ 2.62
NclP09405 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NclP09405 Gm9847-201ENSMUST00000052528 599 ntBASIC31.42■■■□□ 2.62
NclP09405 Gm13241-201ENSMUST00000094493 780 ntBASIC31.42■■■□□ 2.62
NclP09405 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
NclP09405 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
NclP09405 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NclP09405 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31.41■■■□□ 2.62
NclP09405 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
NclP09405 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NclP09405 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NclP09405 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC31.41■■■□□ 2.62
NclP09405 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NclP09405 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NclP09405 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NclP09405 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC31.4■■■□□ 2.62
NclP09405 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NclP09405 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NclP09405 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NclP09405 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NclP09405 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NclP09405 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
NclP09405 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NclP09405 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NclP09405 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NclP09405 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NclP09405 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NclP09405 AC116713.1-201ENSMUST00000215074 430 ntBASIC31.38■■■□□ 2.61
NclP09405 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
NclP09405 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NclP09405 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NclP09405 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
NclP09405 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NclP09405 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NclP09405 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NclP09405 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
NclP09405 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.35■■■□□ 2.61
NclP09405 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NclP09405 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NclP09405 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NclP09405 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NclP09405 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NclP09405 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
NclP09405 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.33■■■□□ 2.61
NclP09405 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Gm12922-201ENSMUST00000120626 809 ntBASIC31.33■■■□□ 2.61
NclP09405 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.33■■■□□ 2.61
NclP09405 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NclP09405 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NclP09405 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.32■■■□□ 2.6
NclP09405 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NclP09405 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
NclP09405 AC158990.1-201ENSMUST00000221450 2016 ntBASIC31.32■■■□□ 2.6
NclP09405 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
NclP09405 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
NclP09405 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NclP09405 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
NclP09405 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NclP09405 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NclP09405 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NclP09405 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NclP09405 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NclP09405 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NclP09405 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NclP09405 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NclP09405 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NclP09405 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.28■■■□□ 2.6
NclP09405 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms