Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Mtco1P00397 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.3■■□□□ 1.32
Mtco1P00397 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.3■■□□□ 1.32
Mtco1P00397 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Mtco1P00397 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.3■■□□□ 1.32
Mtco1P00397 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mtco1P00397 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.29■■□□□ 1.32
Mtco1P00397 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Mtco1P00397 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mtco1P00397 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mtco1P00397 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.29■■□□□ 1.32
Mtco1P00397 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Mtco1P00397 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Mtco1P00397 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.28■■□□□ 1.32
Mtco1P00397 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.28■■□□□ 1.32
Mtco1P00397 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.28■■□□□ 1.32
Mtco1P00397 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Mtco1P00397 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Mtco1P00397 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mtco1P00397 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.27■■□□□ 1.32
Mtco1P00397 Gm12922-201ENSMUST00000120626 809 ntBASIC23.27■■□□□ 1.32
Mtco1P00397 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.27■■□□□ 1.32
Mtco1P00397 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.27■■□□□ 1.32
Mtco1P00397 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mtco1P00397 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mtco1P00397 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.26■■□□□ 1.31
Mtco1P00397 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Mtco1P00397 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Mtco1P00397 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Mtco1P00397 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
Mtco1P00397 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Mtco1P00397 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.25■■□□□ 1.31
Mtco1P00397 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Mtco1P00397 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Mtco1P00397 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Mtco1P00397 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
Mtco1P00397 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Mtco1P00397 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.24■■□□□ 1.31
Mtco1P00397 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Mtco1P00397 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.24■■□□□ 1.31
Mtco1P00397 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Mtco1P00397 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Mtco1P00397 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Mtco1P00397 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Mtco1P00397 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Mtco1P00397 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Mtco1P00397 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.22■■□□□ 1.31
Mtco1P00397 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.22■■□□□ 1.31
Mtco1P00397 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Mtco1P00397 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Mtco1P00397 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Mtco1P00397 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Mtco1P00397 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Mtco1P00397 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Mtco1P00397 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.21■■□□□ 1.31
Mtco1P00397 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.21■■□□□ 1.31
Mtco1P00397 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Mtco1P00397 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Mtco1P00397 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Mtco1P00397 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Mtco1P00397 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Mtco1P00397 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.2■■□□□ 1.3
Mtco1P00397 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
Mtco1P00397 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Mtco1P00397 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Mtco1P00397 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Mtco1P00397 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Mtco1P00397 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Mtco1P00397 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Mtco1P00397 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Mtco1P00397 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Mtco1P00397 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Mtco1P00397 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.18■■□□□ 1.3
Mtco1P00397 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Mtco1P00397 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.17■■□□□ 1.3
Mtco1P00397 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Mtco1P00397 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Mtco1P00397 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Mtco1P00397 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms