Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops3O88543 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.91■□□□□ 0.62
Cops3O88543 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
Cops3O88543 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops3O88543 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops3O88543 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.9■□□□□ 0.62
Cops3O88543 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops3O88543 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.9■□□□□ 0.62
Cops3O88543 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops3O88543 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops3O88543 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cops3O88543 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops3O88543 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops3O88543 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops3O88543 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops3O88543 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cops3O88543 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops3O88543 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops3O88543 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cops3O88543 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops3O88543 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops3O88543 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops3O88543 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cops3O88543 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cops3O88543 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.84■□□□□ 0.61
Cops3O88543 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cops3O88543 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops3O88543 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cops3O88543 Gm11687-201ENSMUST00000118911 886 ntBASIC18.83■□□□□ 0.6
Cops3O88543 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops3O88543 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops3O88543 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cops3O88543 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cops3O88543 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops3O88543 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cops3O88543 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.82■□□□□ 0.6
Cops3O88543 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.81■□□□□ 0.6
Cops3O88543 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cops3O88543 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops3O88543 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.8■□□□□ 0.6
Cops3O88543 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cops3O88543 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops3O88543 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops3O88543 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.79■□□□□ 0.6
Cops3O88543 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops3O88543 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops3O88543 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cops3O88543 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops3O88543 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops3O88543 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.78■□□□□ 0.6
Cops3O88543 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Cops3O88543 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms