Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh16O88338 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.64■□□□□ 0.9
Cdh16O88338 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.64■□□□□ 0.9
Cdh16O88338 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.64■□□□□ 0.89
Cdh16O88338 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh16O88338 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh16O88338 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh16O88338 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh16O88338 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.63■□□□□ 0.89
Cdh16O88338 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh16O88338 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cdh16O88338 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh16O88338 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdh16O88338 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdh16O88338 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdh16O88338 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh16O88338 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cdh16O88338 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh16O88338 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdh16O88338 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh16O88338 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdh16O88338 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh16O88338 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh16O88338 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.6■□□□□ 0.89
Cdh16O88338 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh16O88338 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
Cdh16O88338 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh16O88338 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cdh16O88338 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdh16O88338 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.6■□□□□ 0.89
Cdh16O88338 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh16O88338 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.59■□□□□ 0.89
Cdh16O88338 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cdh16O88338 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh16O88338 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cdh16O88338 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdh16O88338 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Gm45364-201ENSMUST00000210883 159 ntBASIC20.58■□□□□ 0.89
Cdh16O88338 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdh16O88338 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh16O88338 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cdh16O88338 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.58■□□□□ 0.88
Cdh16O88338 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.58■□□□□ 0.88
Cdh16O88338 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh16O88338 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh16O88338 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh16O88338 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh16O88338 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh16O88338 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdh16O88338 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cdh16O88338 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.57■□□□□ 0.88
Cdh16O88338 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh16O88338 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdh16O88338 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdh16O88338 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh16O88338 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh16O88338 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh16O88338 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh16O88338 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh16O88338 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdh16O88338 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cdh16O88338 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdh16O88338 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh16O88338 Golph3-202ENSMUST00000226517 2359 ntBASIC20.54■□□□□ 0.88
Cdh16O88338 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cdh16O88338 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh16O88338 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdh16O88338 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdh16O88338 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh16O88338 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdh16O88338 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms