Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
BckdkO55028 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BckdkO55028 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BckdkO55028 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BckdkO55028 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
BckdkO55028 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.53■□□□□ 0.72
BckdkO55028 Rps24-207ENSMUST00000224568 714 ntBASIC19.53■□□□□ 0.72
BckdkO55028 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BckdkO55028 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BckdkO55028 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BckdkO55028 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BckdkO55028 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
BckdkO55028 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BckdkO55028 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
BckdkO55028 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BckdkO55028 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.51■□□□□ 0.71
BckdkO55028 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.51■□□□□ 0.71
BckdkO55028 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BckdkO55028 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BckdkO55028 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BckdkO55028 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.5■□□□□ 0.71
BckdkO55028 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BckdkO55028 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BckdkO55028 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BckdkO55028 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
BckdkO55028 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.48■□□□□ 0.71
BckdkO55028 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.48■□□□□ 0.71
BckdkO55028 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
BckdkO55028 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
BckdkO55028 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BckdkO55028 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BckdkO55028 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BckdkO55028 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BckdkO55028 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.47■□□□□ 0.71
BckdkO55028 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BckdkO55028 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BckdkO55028 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BckdkO55028 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BckdkO55028 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.46■□□□□ 0.71
BckdkO55028 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BckdkO55028 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BckdkO55028 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
BckdkO55028 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BckdkO55028 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BckdkO55028 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.45■□□□□ 0.7
BckdkO55028 Gm10232-201ENSMUST00000089221 720 ntBASIC19.45■□□□□ 0.7
BckdkO55028 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BckdkO55028 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BckdkO55028 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
BckdkO55028 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BckdkO55028 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BckdkO55028 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BckdkO55028 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BckdkO55028 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BckdkO55028 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BckdkO55028 Gm45102-201ENSMUST00000207427 857 ntBASIC19.43■□□□□ 0.7
BckdkO55028 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BckdkO55028 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BckdkO55028 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.42■□□□□ 0.7
BckdkO55028 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms