Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf213E9Q555 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf213E9Q555 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Gm10033-202ENSMUST00000211874 928 ntBASIC10.63□□□□□ -0.71
Rnf213E9Q555 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.63□□□□□ -0.71
Rnf213E9Q555 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm9870-201ENSMUST00000063874 645 ntBASIC10.61□□□□□ -0.71
Rnf213E9Q555 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm43060-201ENSMUST00000200621 289 ntBASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 AC117245.4-201ENSMUST00000217388 1646 ntBASIC10.6□□□□□ -0.71
Rnf213E9Q555 Gm26833-201ENSMUST00000180899 440 ntBASIC10.6□□□□□ -0.71
Rnf213E9Q555 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm42642-201ENSMUST00000200683 355 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm10620-201ENSMUST00000098379 1332 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm10657-201ENSMUST00000193528 1031 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC10.58□□□□□ -0.72
Rnf213E9Q555 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms