Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf213E9Q555 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf213E9Q555 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Gm10033-202ENSMUST00000211874 928 ntBASIC10.63□□□□□ -0.71
Rnf213E9Q555 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.63□□□□□ -0.71
Rnf213E9Q555 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.63□□□□□ -0.71
Rnf213E9Q555 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rnf213E9Q555 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm9870-201ENSMUST00000063874 645 ntBASIC10.61□□□□□ -0.71
Rnf213E9Q555 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm43060-201ENSMUST00000200621 289 ntBASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rnf213E9Q555 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 AC117245.4-201ENSMUST00000217388 1646 ntBASIC10.6□□□□□ -0.71
Rnf213E9Q555 Gm26833-201ENSMUST00000180899 440 ntBASIC10.6□□□□□ -0.71
Rnf213E9Q555 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Rnf213E9Q555 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rnf213E9Q555 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm42642-201ENSMUST00000200683 355 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm10620-201ENSMUST00000098379 1332 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Gm10657-201ENSMUST00000193528 1031 ntBASIC10.59□□□□□ -0.71
Rnf213E9Q555 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf213E9Q555 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC10.58□□□□□ -0.72
Rnf213E9Q555 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf213E9Q555 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf213E9Q555 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms