Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Herc1E9PZP8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc1E9PZP8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Herc1E9PZP8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.48□□□□□ -0.41
Herc1E9PZP8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gm20760-201ENSMUST00000179197 648 ntBASIC12.46□□□□□ -0.41
Herc1E9PZP8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Herc1E9PZP8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Herc1E9PZP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC12.45□□□□□ -0.42
Herc1E9PZP8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.43□□□□□ -0.42
Herc1E9PZP8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Gm12251-201ENSMUST00000117893 792 ntBASIC12.42□□□□□ -0.42
Herc1E9PZP8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.41□□□□□ -0.42
Herc1E9PZP8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm4419-202ENSMUST00000226239 1431 ntBASIC12.41□□□□□ -0.42
Herc1E9PZP8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC12.4□□□□□ -0.43
Herc1E9PZP8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.39□□□□□ -0.43
Herc1E9PZP8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms