Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Herc1E9PZP8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc1E9PZP8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Herc1E9PZP8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.48□□□□□ -0.41
Herc1E9PZP8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc1E9PZP8 Gm20760-201ENSMUST00000179197 648 ntBASIC12.46□□□□□ -0.41
Herc1E9PZP8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc1E9PZP8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Herc1E9PZP8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Herc1E9PZP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC12.45□□□□□ -0.42
Herc1E9PZP8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc1E9PZP8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc1E9PZP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Herc1E9PZP8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.43□□□□□ -0.42
Herc1E9PZP8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Herc1E9PZP8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Gm12251-201ENSMUST00000117893 792 ntBASIC12.42□□□□□ -0.42
Herc1E9PZP8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.42□□□□□ -0.42
Herc1E9PZP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Herc1E9PZP8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.41□□□□□ -0.42
Herc1E9PZP8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Herc1E9PZP8 Gm4419-202ENSMUST00000226239 1431 ntBASIC12.41□□□□□ -0.42
Herc1E9PZP8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC12.4□□□□□ -0.42
Herc1E9PZP8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Herc1E9PZP8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC12.4□□□□□ -0.43
Herc1E9PZP8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.39□□□□□ -0.43
Herc1E9PZP8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Herc1E9PZP8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 414.9 ms