Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim17A0A504 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smim17A0A504 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.15■□□□□ 0.66
Smim17A0A504 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim17A0A504 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Smim17A0A504 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smim17A0A504 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim17A0A504 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim17A0A504 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smim17A0A504 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim17A0A504 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim17A0A504 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim17A0A504 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim17A0A504 Gm37136-201ENSMUST00000194368 194 ntBASIC19.13■□□□□ 0.65
Smim17A0A504 Gm45855-201ENSMUST00000212546 880 ntBASIC19.13■□□□□ 0.65
Smim17A0A504 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim17A0A504 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smim17A0A504 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smim17A0A504 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim17A0A504 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim17A0A504 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim17A0A504 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smim17A0A504 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smim17A0A504 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim17A0A504 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smim17A0A504 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.12■□□□□ 0.65
Smim17A0A504 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim17A0A504 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim17A0A504 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim17A0A504 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smim17A0A504 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim17A0A504 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim17A0A504 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Smim17A0A504 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smim17A0A504 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smim17A0A504 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smim17A0A504 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smim17A0A504 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smim17A0A504 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smim17A0A504 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smim17A0A504 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim17A0A504 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.09■□□□□ 0.65
Smim17A0A504 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim17A0A504 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.09■□□□□ 0.65
Smim17A0A504 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim17A0A504 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim17A0A504 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim17A0A504 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.07■□□□□ 0.64
Smim17A0A504 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim17A0A504 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smim17A0A504 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim17A0A504 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Smim17A0A504 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smim17A0A504 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim17A0A504 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim17A0A504 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.06■□□□□ 0.64
Smim17A0A504 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim17A0A504 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.06■□□□□ 0.64
Smim17A0A504 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.05■□□□□ 0.64
Smim17A0A504 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smim17A0A504 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smim17A0A504 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smim17A0A504 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.03■□□□□ 0.64
Smim17A0A504 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim17A0A504 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smim17A0A504 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smim17A0A504 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smim17A0A504 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms