Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv17A0A140T8P8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv17A0A140T8P8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv17A0A140T8P8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv17A0A140T8P8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv17A0A140T8P8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv17A0A140T8P8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv17A0A140T8P8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trbv17A0A140T8P8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv17A0A140T8P8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv17A0A140T8P8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms