Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc194A0A140LIT1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc194A0A140LIT1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Gm5987-201ENSMUST00000196433 1151 ntBASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc194A0A140LIT1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc194A0A140LIT1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Gm11175-201ENSMUST00000116172 543 ntBASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc194A0A140LIT1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Gm7332-201ENSMUST00000118351 454 ntBASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc194A0A140LIT1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc194A0A140LIT1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc194A0A140LIT1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc194A0A140LIT1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc194A0A140LIT1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc194A0A140LIT1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.95■□□□□ 0.94
Ccdc194A0A140LIT1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc194A0A140LIT1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc194A0A140LIT1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc194A0A140LIT1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc194A0A140LIT1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc194A0A140LIT1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.92■□□□□ 0.94
Ccdc194A0A140LIT1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc194A0A140LIT1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc194A0A140LIT1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc194A0A140LIT1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc194A0A140LIT1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc194A0A140LIT1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc194A0A140LIT1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc194A0A140LIT1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms