Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-2A0A0G2JF93 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-2A0A0G2JF93 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-2A0A0G2JF93 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-2A0A0G2JF93 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-2A0A0G2JF93 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-2A0A0G2JF93 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-2A0A0G2JF93 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13n-2A0A0G2JF93 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13n-2A0A0G2JF93 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav13n-2A0A0G2JF93 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Gm22567-201ENSMUST00000175542 342 ntBASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-2A0A0G2JF93 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-2A0A0G2JF93 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-2A0A0G2JF93 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms