Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.41■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv5-39A0A0G2JDV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.4■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv5-39A0A0G2JDV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.38■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.35■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Igkv5-39A0A0G2JDV4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.33■■□□□ 1
Igkv5-39A0A0G2JDV4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Igkv5-39A0A0G2JDV4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Igkv5-39A0A0G2JDV4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms