Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv30A0A0B4J1P1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv30A0A0B4J1P1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv30A0A0B4J1P1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv30A0A0B4J1P1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv30A0A0B4J1P1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Gm13238-201ENSMUST00000117655 780 ntBASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv30A0A0B4J1P1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv30A0A0B4J1P1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv30A0A0B4J1P1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv30A0A0B4J1P1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv30A0A0B4J1P1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv30A0A0B4J1P1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trbv30A0A0B4J1P1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv30A0A0B4J1P1 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms