Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-43A0A0A6YXN5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-43A0A0A6YXN5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.63■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-43A0A0A6YXN5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.59■□□□□ 0.73
Ighv1-43A0A0A6YXN5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.58■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-43A0A0A6YXN5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.58■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Gm9847-201ENSMUST00000052528 599 ntBASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Gm13241-201ENSMUST00000094493 780 ntBASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Gm12922-201ENSMUST00000120626 809 ntBASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-43A0A0A6YXN5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-43A0A0A6YXN5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.53■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-43A0A0A6YXN5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms