Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rhox4bQ9JI43 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rhox4bQ9JI43 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rhox4bQ9JI43 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rhox4bQ9JI43 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rhox4bQ9JI43 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rhox4bQ9JI43 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rhox4bQ9JI43 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Rhox4bQ9JI43 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rhox4bQ9JI43 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rhox4bQ9JI43 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rhox4bQ9JI43 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rhox4bQ9JI43 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rhox4bQ9JI43 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rhox4bQ9JI43 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rhox4bQ9JI43 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.51■■□□□ 1.03
Rhox4bQ9JI43 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rhox4bQ9JI43 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rhox4bQ9JI43 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rhox4bQ9JI43 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rhox4bQ9JI43 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhox4bQ9JI43 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rhox4bQ9JI43 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rhox4bQ9JI43 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rhox4bQ9JI43 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rhox4bQ9JI43 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rhox4bQ9JI43 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rhox4bQ9JI43 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rhox4bQ9JI43 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rhox4bQ9JI43 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rhox4bQ9JI43 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Rhox4bQ9JI43 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.21■□□□□ 0.99
Rhox4bQ9JI43 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rhox4bQ9JI43 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.19■□□□□ 0.98
Rhox4bQ9JI43 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rhox4bQ9JI43 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rhox4bQ9JI43 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rhox4bQ9JI43 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Rhox4bQ9JI43 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rhox4bQ9JI43 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rhox4bQ9JI43 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rhox4bQ9JI43 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rhox4bQ9JI43 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rhox4bQ9JI43 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rhox4bQ9JI43 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rhox4bQ9JI43 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rhox4bQ9JI43 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Rhox4bQ9JI43 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rhox4bQ9JI43 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rhox4bQ9JI43 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.05■□□□□ 0.96
Rhox4bQ9JI43 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
Rhox4bQ9JI43 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rhox4bQ9JI43 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rhox4bQ9JI43 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rhox4bQ9JI43 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rhox4bQ9JI43 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rhox4bQ9JI43 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rhox4bQ9JI43 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhox4bQ9JI43 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rhox4bQ9JI43 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.96■□□□□ 0.95
Rhox4bQ9JI43 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhox4bQ9JI43 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhox4bQ9JI43 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rhox4bQ9JI43 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhox4bQ9JI43 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rhox4bQ9JI43 Gm27325-201ENSMUST00000175467 74 ntBASIC20.88■□□□□ 0.93
Rhox4bQ9JI43 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rhox4bQ9JI43 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rhox4bQ9JI43 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rhox4bQ9JI43 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rhox4bQ9JI43 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rhox4bQ9JI43 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rhox4bQ9JI43 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rhox4bQ9JI43 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rhox4bQ9JI43 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.78■□□□□ 0.92
Rhox4bQ9JI43 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rhox4bQ9JI43 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rhox4bQ9JI43 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Rhox4bQ9JI43 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rhox4bQ9JI43 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rhox4bQ9JI43 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rhox4bQ9JI43 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhox4bQ9JI43 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhox4bQ9JI43 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rhox4bQ9JI43 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rhox4bQ9JI43 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rhox4bQ9JI43 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rhox4bQ9JI43 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rhox4bQ9JI43 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rhox4bQ9JI43 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rhox4bQ9JI43 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.68■□□□□ 0.9
Rhox4bQ9JI43 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rhox4bQ9JI43 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rhox4bQ9JI43 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rhox4bQ9JI43 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rhox4bQ9JI43 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rhox4bQ9JI43 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.63■□□□□ 0.89
Rhox4bQ9JI43 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rhox4bQ9JI43 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rhox4bQ9JI43 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms