Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rtn3Q9ES97 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Rtn3Q9ES97 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn3Q9ES97 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn3Q9ES97 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn3Q9ES97 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.17■■■□□ 2.26
Rtn3Q9ES97 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rtn3Q9ES97 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rtn3Q9ES97 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rtn3Q9ES97 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.09■■■□□ 2.25
Rtn3Q9ES97 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rtn3Q9ES97 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Rtn3Q9ES97 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rtn3Q9ES97 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rtn3Q9ES97 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rtn3Q9ES97 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Rtn3Q9ES97 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29■■■□□ 2.23
Rtn3Q9ES97 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Rtn3Q9ES97 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Rtn3Q9ES97 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.93■■■□□ 2.22
Rtn3Q9ES97 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rtn3Q9ES97 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.87■■■□□ 2.21
Rtn3Q9ES97 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.86■■■□□ 2.21
Rtn3Q9ES97 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.84■■■□□ 2.21
Rtn3Q9ES97 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtn3Q9ES97 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Rtn3Q9ES97 Gm26115-201ENSMUST00000175605 87 ntBASIC28.77■■■□□ 2.2
Rtn3Q9ES97 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Rtn3Q9ES97 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rtn3Q9ES97 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rtn3Q9ES97 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rtn3Q9ES97 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rtn3Q9ES97 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rtn3Q9ES97 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rtn3Q9ES97 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rtn3Q9ES97 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.65■■■□□ 2.18
Rtn3Q9ES97 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rtn3Q9ES97 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Rtn3Q9ES97 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.63■■■□□ 2.17
Rtn3Q9ES97 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rtn3Q9ES97 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.56■■■□□ 2.16
Rtn3Q9ES97 Gm8109-201ENSMUST00000194076 746 ntBASIC28.54■■■□□ 2.16
Rtn3Q9ES97 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.52■■■□□ 2.16
Rtn3Q9ES97 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Rtn3Q9ES97 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rtn3Q9ES97 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Rtn3Q9ES97 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtn3Q9ES97 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.46■■■□□ 2.15
Rtn3Q9ES97 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Rtn3Q9ES97 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtn3Q9ES97 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Rtn3Q9ES97 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rtn3Q9ES97 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rtn3Q9ES97 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtn3Q9ES97 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
Rtn3Q9ES97 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn3Q9ES97 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rtn3Q9ES97 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rtn3Q9ES97 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.27■■■□□ 2.12
Rtn3Q9ES97 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rtn3Q9ES97 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rtn3Q9ES97 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rtn3Q9ES97 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtn3Q9ES97 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn3Q9ES97 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn3Q9ES97 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn3Q9ES97 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Rtn3Q9ES97 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
Rtn3Q9ES97 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.2■■■□□ 2.11
Rtn3Q9ES97 Gm27322-201ENSMUST00000184007 104 ntBASIC28.15■■■□□ 2.1
Rtn3Q9ES97 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.15■■■□□ 2.1
Rtn3Q9ES97 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Rtn3Q9ES97 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtn3Q9ES97 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Rtn3Q9ES97 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rtn3Q9ES97 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rtn3Q9ES97 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rtn3Q9ES97 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Rtn3Q9ES97 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rtn3Q9ES97 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Rtn3Q9ES97 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rtn3Q9ES97 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.91■■■□□ 2.06
Rtn3Q9ES97 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rtn3Q9ES97 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rtn3Q9ES97 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.9■■■□□ 2.06
Rtn3Q9ES97 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rtn3Q9ES97 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rtn3Q9ES97 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Rtn3Q9ES97 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.87■■■□□ 2.05
Rtn3Q9ES97 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Rtn3Q9ES97 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rtn3Q9ES97 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.85■■■□□ 2.05
Rtn3Q9ES97 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Rtn3Q9ES97 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rtn3Q9ES97 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtn3Q9ES97 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rtn3Q9ES97 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rtn3Q9ES97 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Rtn3Q9ES97 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.7■■■□□ 2.02
Rtn3Q9ES97 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms