Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Lime1Q9EQR5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lime1Q9EQR5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lime1Q9EQR5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.19■■□□□ 1.46
Lime1Q9EQR5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lime1Q9EQR5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Lime1Q9EQR5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Lime1Q9EQR5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lime1Q9EQR5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Lime1Q9EQR5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lime1Q9EQR5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lime1Q9EQR5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lime1Q9EQR5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24■■□□□ 1.43
Lime1Q9EQR5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lime1Q9EQR5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.99■■□□□ 1.43
Lime1Q9EQR5 Gm25238-201ENSMUST00000174914 89 ntBASIC23.98■■□□□ 1.43
Lime1Q9EQR5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lime1Q9EQR5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.93■■□□□ 1.42
Lime1Q9EQR5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Lime1Q9EQR5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lime1Q9EQR5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Lime1Q9EQR5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lime1Q9EQR5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.83■■□□□ 1.41
Lime1Q9EQR5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Lime1Q9EQR5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Lime1Q9EQR5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lime1Q9EQR5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lime1Q9EQR5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lime1Q9EQR5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lime1Q9EQR5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.76■■□□□ 1.39
Lime1Q9EQR5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Lime1Q9EQR5 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.73■■□□□ 1.39
Lime1Q9EQR5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lime1Q9EQR5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lime1Q9EQR5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lime1Q9EQR5 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.6■■□□□ 1.37
Lime1Q9EQR5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.6■■□□□ 1.37
Lime1Q9EQR5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lime1Q9EQR5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Lime1Q9EQR5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Lime1Q9EQR5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Lime1Q9EQR5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lime1Q9EQR5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lime1Q9EQR5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.53■■□□□ 1.36
Lime1Q9EQR5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lime1Q9EQR5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Lime1Q9EQR5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Lime1Q9EQR5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Lime1Q9EQR5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lime1Q9EQR5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lime1Q9EQR5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.47■■□□□ 1.35
Lime1Q9EQR5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lime1Q9EQR5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.45■■□□□ 1.34
Lime1Q9EQR5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.42■■□□□ 1.34
Lime1Q9EQR5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Lime1Q9EQR5 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.41■■□□□ 1.34
Lime1Q9EQR5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Lime1Q9EQR5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lime1Q9EQR5 Rab21-202ENSMUST00000218831 843 ntBASIC23.38■■□□□ 1.33
Lime1Q9EQR5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.35■■□□□ 1.33
Lime1Q9EQR5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.34■■□□□ 1.33
Lime1Q9EQR5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Lime1Q9EQR5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lime1Q9EQR5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lime1Q9EQR5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lime1Q9EQR5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.28■■□□□ 1.32
Lime1Q9EQR5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lime1Q9EQR5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lime1Q9EQR5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lime1Q9EQR5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lime1Q9EQR5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lime1Q9EQR5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.24■■□□□ 1.31
Lime1Q9EQR5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Lime1Q9EQR5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lime1Q9EQR5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lime1Q9EQR5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Lime1Q9EQR5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lime1Q9EQR5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lime1Q9EQR5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lime1Q9EQR5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lime1Q9EQR5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Lime1Q9EQR5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.17■■□□□ 1.3
Lime1Q9EQR5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.16■■□□□ 1.3
Lime1Q9EQR5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Lime1Q9EQR5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lime1Q9EQR5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Lime1Q9EQR5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
Lime1Q9EQR5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lime1Q9EQR5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Lime1Q9EQR5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Lime1Q9EQR5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lime1Q9EQR5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.06■■□□□ 1.28
Lime1Q9EQR5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lime1Q9EQR5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lime1Q9EQR5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lime1Q9EQR5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lime1Q9EQR5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lime1Q9EQR5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Lime1Q9EQR5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lime1Q9EQR5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms