Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Rnf135Q9CWS1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Rnf135Q9CWS1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rnf135Q9CWS1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rnf135Q9CWS1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Rnf135Q9CWS1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rnf135Q9CWS1 Gm25262-201ENSMUST00000174934 133 ntBASIC28.68■■■□□ 2.18
Rnf135Q9CWS1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rnf135Q9CWS1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rnf135Q9CWS1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.6■■■□□ 2.17
Rnf135Q9CWS1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.58■■■□□ 2.17
Rnf135Q9CWS1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rnf135Q9CWS1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.48■■■□□ 2.15
Rnf135Q9CWS1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf135Q9CWS1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rnf135Q9CWS1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rnf135Q9CWS1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rnf135Q9CWS1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf135Q9CWS1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf135Q9CWS1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rnf135Q9CWS1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.24■■■□□ 2.11
Rnf135Q9CWS1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.2■■■□□ 2.1
Rnf135Q9CWS1 Rab21-202ENSMUST00000218831 843 ntBASIC28.2■■■□□ 2.1
Rnf135Q9CWS1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rnf135Q9CWS1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.19■■■□□ 2.1
Rnf135Q9CWS1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf135Q9CWS1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.17■■■□□ 2.1
Rnf135Q9CWS1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.17■■■□□ 2.1
Rnf135Q9CWS1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf135Q9CWS1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rnf135Q9CWS1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf135Q9CWS1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf135Q9CWS1 Gm26115-201ENSMUST00000175605 87 ntBASIC28.07■■■□□ 2.08
Rnf135Q9CWS1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.06■■■□□ 2.08
Rnf135Q9CWS1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Rnf135Q9CWS1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Rnf135Q9CWS1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rnf135Q9CWS1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rnf135Q9CWS1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf135Q9CWS1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf135Q9CWS1 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.96■■■□□ 2.07
Rnf135Q9CWS1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Rnf135Q9CWS1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.92■■■□□ 2.06
Rnf135Q9CWS1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rnf135Q9CWS1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rnf135Q9CWS1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Rnf135Q9CWS1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Rnf135Q9CWS1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rnf135Q9CWS1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf135Q9CWS1 Gm8109-201ENSMUST00000194076 746 ntBASIC27.85■■■□□ 2.05
Rnf135Q9CWS1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf135Q9CWS1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf135Q9CWS1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.83■■■□□ 2.04
Rnf135Q9CWS1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rnf135Q9CWS1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.8■■■□□ 2.04
Rnf135Q9CWS1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Rnf135Q9CWS1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf135Q9CWS1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.75■■■□□ 2.03
Rnf135Q9CWS1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rnf135Q9CWS1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rnf135Q9CWS1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rnf135Q9CWS1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.7■■■□□ 2.02
Rnf135Q9CWS1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rnf135Q9CWS1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rnf135Q9CWS1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Rnf135Q9CWS1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
Rnf135Q9CWS1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.64■■■□□ 2.02
Rnf135Q9CWS1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rnf135Q9CWS1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rnf135Q9CWS1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rnf135Q9CWS1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.6■■■□□ 2.01
Rnf135Q9CWS1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rnf135Q9CWS1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rnf135Q9CWS1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rnf135Q9CWS1 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.57■■■□□ 2
Rnf135Q9CWS1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rnf135Q9CWS1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Rnf135Q9CWS1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.52■■■□□ 2
Rnf135Q9CWS1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf135Q9CWS1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf135Q9CWS1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rnf135Q9CWS1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rnf135Q9CWS1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rnf135Q9CWS1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rnf135Q9CWS1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Rnf135Q9CWS1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Rnf135Q9CWS1 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.34■■□□□ 1.97
Rnf135Q9CWS1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.33■■□□□ 1.97
Rnf135Q9CWS1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rnf135Q9CWS1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rnf135Q9CWS1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.27■■□□□ 1.96
Rnf135Q9CWS1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rnf135Q9CWS1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rnf135Q9CWS1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rnf135Q9CWS1 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.21■■□□□ 1.95
Rnf135Q9CWS1 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.21■■□□□ 1.95
Rnf135Q9CWS1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf135Q9CWS1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rnf135Q9CWS1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Rnf135Q9CWS1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms