Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
2210010C04RikQ9CPN9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
2210010C04RikQ9CPN9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
2210010C04RikQ9CPN9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
2210010C04RikQ9CPN9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
2210010C04RikQ9CPN9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
2210010C04RikQ9CPN9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
2210010C04RikQ9CPN9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
2210010C04RikQ9CPN9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
2210010C04RikQ9CPN9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
2210010C04RikQ9CPN9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
2210010C04RikQ9CPN9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.35■■□□□ 1.33
2210010C04RikQ9CPN9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.31■■□□□ 1.32
2210010C04RikQ9CPN9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
2210010C04RikQ9CPN9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.26■■□□□ 1.31
2210010C04RikQ9CPN9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
2210010C04RikQ9CPN9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
2210010C04RikQ9CPN9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.24■■□□□ 1.31
2210010C04RikQ9CPN9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
2210010C04RikQ9CPN9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
2210010C04RikQ9CPN9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
2210010C04RikQ9CPN9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.18■■□□□ 1.3
2210010C04RikQ9CPN9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
2210010C04RikQ9CPN9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
2210010C04RikQ9CPN9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
2210010C04RikQ9CPN9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.09■■□□□ 1.29
2210010C04RikQ9CPN9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
2210010C04RikQ9CPN9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
2210010C04RikQ9CPN9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
2210010C04RikQ9CPN9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
2210010C04RikQ9CPN9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
2210010C04RikQ9CPN9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
2210010C04RikQ9CPN9 Rab21-202ENSMUST00000218831 843 ntBASIC23.03■■□□□ 1.28
2210010C04RikQ9CPN9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.02■■□□□ 1.28
2210010C04RikQ9CPN9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23■■□□□ 1.27
2210010C04RikQ9CPN9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
2210010C04RikQ9CPN9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.95■■□□□ 1.26
2210010C04RikQ9CPN9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
2210010C04RikQ9CPN9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.92■■□□□ 1.26
2210010C04RikQ9CPN9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
2210010C04RikQ9CPN9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
2210010C04RikQ9CPN9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.87■■□□□ 1.25
2210010C04RikQ9CPN9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
2210010C04RikQ9CPN9 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.75■■□□□ 1.23
2210010C04RikQ9CPN9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.75■■□□□ 1.23
2210010C04RikQ9CPN9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
2210010C04RikQ9CPN9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
2210010C04RikQ9CPN9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
2210010C04RikQ9CPN9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Gm25262-201ENSMUST00000174934 133 ntBASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
2210010C04RikQ9CPN9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
2210010C04RikQ9CPN9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
2210010C04RikQ9CPN9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
2210010C04RikQ9CPN9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
2210010C04RikQ9CPN9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
2210010C04RikQ9CPN9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
2210010C04RikQ9CPN9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.64■■□□□ 1.22
2210010C04RikQ9CPN9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
2210010C04RikQ9CPN9 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.59■■□□□ 1.21
2210010C04RikQ9CPN9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.54■■□□□ 1.2
2210010C04RikQ9CPN9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
2210010C04RikQ9CPN9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
2210010C04RikQ9CPN9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
2210010C04RikQ9CPN9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
2210010C04RikQ9CPN9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
2210010C04RikQ9CPN9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
2210010C04RikQ9CPN9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
2210010C04RikQ9CPN9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
2210010C04RikQ9CPN9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
2210010C04RikQ9CPN9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
2210010C04RikQ9CPN9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
2210010C04RikQ9CPN9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
2210010C04RikQ9CPN9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms