Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Raf1Q99N57 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Raf1Q99N57 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.28■■□□□ 1.48
Raf1Q99N57 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Raf1Q99N57 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Raf1Q99N57 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Raf1Q99N57 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Raf1Q99N57 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Raf1Q99N57 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Raf1Q99N57 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Raf1Q99N57 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.2■■□□□ 1.46
Raf1Q99N57 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Raf1Q99N57 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Raf1Q99N57 Gm27325-201ENSMUST00000175467 74 ntBASIC24.14■■□□□ 1.45
Raf1Q99N57 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Raf1Q99N57 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.1■■□□□ 1.45
Raf1Q99N57 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.09■■□□□ 1.45
Raf1Q99N57 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Raf1Q99N57 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.09■■□□□ 1.45
Raf1Q99N57 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Raf1Q99N57 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.07■■□□□ 1.44
Raf1Q99N57 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.06■■□□□ 1.44
Raf1Q99N57 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Raf1Q99N57 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Raf1Q99N57 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Raf1Q99N57 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Raf1Q99N57 Gm26115-201ENSMUST00000175605 87 ntBASIC23.98■■□□□ 1.43
Raf1Q99N57 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Raf1Q99N57 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Raf1Q99N57 Rab21-202ENSMUST00000218831 843 ntBASIC23.95■■□□□ 1.42
Raf1Q99N57 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.93■■□□□ 1.42
Raf1Q99N57 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
Raf1Q99N57 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.93■■□□□ 1.42
Raf1Q99N57 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Raf1Q99N57 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Raf1Q99N57 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Raf1Q99N57 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Raf1Q99N57 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Raf1Q99N57 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Raf1Q99N57 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Raf1Q99N57 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Raf1Q99N57 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Raf1Q99N57 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Raf1Q99N57 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Raf1Q99N57 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Raf1Q99N57 Gm8109-201ENSMUST00000194076 746 ntBASIC23.76■■□□□ 1.39
Raf1Q99N57 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.75■■□□□ 1.39
Raf1Q99N57 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Raf1Q99N57 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Raf1Q99N57 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Raf1Q99N57 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Raf1Q99N57 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Raf1Q99N57 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Raf1Q99N57 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Raf1Q99N57 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.61■■□□□ 1.37
Raf1Q99N57 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Raf1Q99N57 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Raf1Q99N57 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.53■■□□□ 1.36
Raf1Q99N57 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Raf1Q99N57 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Raf1Q99N57 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Raf1Q99N57 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Raf1Q99N57 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Raf1Q99N57 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Raf1Q99N57 Zxda-201ENSMUST00000117281 2621 ntBASIC23.48■■□□□ 1.35
Raf1Q99N57 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.47■■□□□ 1.35
Raf1Q99N57 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.42■■□□□ 1.34
Raf1Q99N57 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Raf1Q99N57 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Raf1Q99N57 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Raf1Q99N57 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Raf1Q99N57 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Raf1Q99N57 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.4■■□□□ 1.34
Raf1Q99N57 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Raf1Q99N57 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Raf1Q99N57 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.36■■□□□ 1.33
Raf1Q99N57 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Raf1Q99N57 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Raf1Q99N57 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Raf1Q99N57 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Raf1Q99N57 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.3■■□□□ 1.32
Raf1Q99N57 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Raf1Q99N57 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Raf1Q99N57 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Raf1Q99N57 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Raf1Q99N57 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Raf1Q99N57 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Raf1Q99N57 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Raf1Q99N57 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.24■■□□□ 1.31
Raf1Q99N57 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Raf1Q99N57 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Raf1Q99N57 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Raf1Q99N57 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Raf1Q99N57 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Raf1Q99N57 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Raf1Q99N57 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Raf1Q99N57 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Raf1Q99N57 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Raf1Q99N57 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.17■■□□□ 1.3
Raf1Q99N57 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms