Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhgb2Q91XX7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.64■■□□□ 1.69
Pcdhgb2Q91XX7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhgb2Q91XX7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhgb2Q91XX7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.6■■□□□ 1.69
Pcdhgb2Q91XX7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhgb2Q91XX7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhgb2Q91XX7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb2Q91XX7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Pcdhgb2Q91XX7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhgb2Q91XX7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhgb2Q91XX7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgb2Q91XX7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.41■■□□□ 1.66
Pcdhgb2Q91XX7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhgb2Q91XX7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhgb2Q91XX7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb2Q91XX7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.36■■□□□ 1.65
Pcdhgb2Q91XX7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhgb2Q91XX7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Pcdhgb2Q91XX7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhgb2Q91XX7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhgb2Q91XX7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhgb2Q91XX7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.3■■□□□ 1.64
Pcdhgb2Q91XX7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgb2Q91XX7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.28■■□□□ 1.64
Pcdhgb2Q91XX7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.25■■□□□ 1.63
Pcdhgb2Q91XX7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Pcdhgb2Q91XX7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Pcdhgb2Q91XX7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdhgb2Q91XX7 Gm25238-201ENSMUST00000174914 89 ntBASIC25.21■■□□□ 1.63
Pcdhgb2Q91XX7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgb2Q91XX7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.16■■□□□ 1.62
Pcdhgb2Q91XX7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb2Q91XX7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhgb2Q91XX7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb2Q91XX7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgb2Q91XX7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgb2Q91XX7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb2Q91XX7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb2Q91XX7 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.04■■□□□ 1.6
Pcdhgb2Q91XX7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.03■■□□□ 1.6
Pcdhgb2Q91XX7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Pcdhgb2Q91XX7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Pcdhgb2Q91XX7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Pcdhgb2Q91XX7 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.95■■□□□ 1.58
Pcdhgb2Q91XX7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb2Q91XX7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgb2Q91XX7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb2Q91XX7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb2Q91XX7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb2Q91XX7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.86■■□□□ 1.57
Pcdhgb2Q91XX7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgb2Q91XX7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
Pcdhgb2Q91XX7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgb2Q91XX7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb2Q91XX7 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.79■■□□□ 1.56
Pcdhgb2Q91XX7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.78■■□□□ 1.56
Pcdhgb2Q91XX7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb2Q91XX7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.77■■□□□ 1.56
Pcdhgb2Q91XX7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb2Q91XX7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
Pcdhgb2Q91XX7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb2Q91XX7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.69■■□□□ 1.54
Pcdhgb2Q91XX7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgb2Q91XX7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgb2Q91XX7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgb2Q91XX7 Rab21-202ENSMUST00000218831 843 ntBASIC24.67■■□□□ 1.54
Pcdhgb2Q91XX7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgb2Q91XX7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhgb2Q91XX7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb2Q91XX7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb2Q91XX7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb2Q91XX7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.62■■□□□ 1.53
Pcdhgb2Q91XX7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcdhgb2Q91XX7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhgb2Q91XX7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb2Q91XX7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhgb2Q91XX7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhgb2Q91XX7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhgb2Q91XX7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb2Q91XX7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Pcdhgb2Q91XX7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgb2Q91XX7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb2Q91XX7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhgb2Q91XX7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb2Q91XX7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb2Q91XX7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb2Q91XX7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.47■■□□□ 1.51
Pcdhgb2Q91XX7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhgb2Q91XX7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.46■■□□□ 1.51
Pcdhgb2Q91XX7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Pcdhgb2Q91XX7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhgb2Q91XX7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb2Q91XX7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhgb2Q91XX7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Pcdhgb2Q91XX7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb2Q91XX7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb2Q91XX7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb2Q91XX7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb2Q91XX7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms