Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ubqln1Q8R317 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.09■■□□□ 1.77
Ubqln1Q8R317 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Ubqln1Q8R317 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubqln1Q8R317 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubqln1Q8R317 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Ubqln1Q8R317 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ubqln1Q8R317 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ubqln1Q8R317 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ubqln1Q8R317 Gm25262-201ENSMUST00000174934 133 ntBASIC25.9■■□□□ 1.74
Ubqln1Q8R317 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.85■■□□□ 1.73
Ubqln1Q8R317 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.83■■□□□ 1.73
Ubqln1Q8R317 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubqln1Q8R317 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.81■■□□□ 1.72
Ubqln1Q8R317 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubqln1Q8R317 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubqln1Q8R317 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubqln1Q8R317 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubqln1Q8R317 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ubqln1Q8R317 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Ubqln1Q8R317 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ubqln1Q8R317 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ubqln1Q8R317 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubqln1Q8R317 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubqln1Q8R317 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubqln1Q8R317 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubqln1Q8R317 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ubqln1Q8R317 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ubqln1Q8R317 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubqln1Q8R317 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
Ubqln1Q8R317 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.61■■□□□ 1.69
Ubqln1Q8R317 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubqln1Q8R317 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ubqln1Q8R317 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ubqln1Q8R317 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ubqln1Q8R317 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ubqln1Q8R317 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.54■■□□□ 1.68
Ubqln1Q8R317 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubqln1Q8R317 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubqln1Q8R317 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.45■■□□□ 1.66
Ubqln1Q8R317 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ubqln1Q8R317 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.39■■□□□ 1.66
Ubqln1Q8R317 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubqln1Q8R317 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.37■■□□□ 1.65
Ubqln1Q8R317 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubqln1Q8R317 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ubqln1Q8R317 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ubqln1Q8R317 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Ubqln1Q8R317 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ubqln1Q8R317 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.29■■□□□ 1.64
Ubqln1Q8R317 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubqln1Q8R317 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ubqln1Q8R317 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ubqln1Q8R317 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Ubqln1Q8R317 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubqln1Q8R317 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ubqln1Q8R317 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubqln1Q8R317 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubqln1Q8R317 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubqln1Q8R317 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.19■■□□□ 1.62
Ubqln1Q8R317 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ubqln1Q8R317 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubqln1Q8R317 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubqln1Q8R317 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.14■■□□□ 1.62
Ubqln1Q8R317 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Ubqln1Q8R317 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ubqln1Q8R317 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ubqln1Q8R317 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Ubqln1Q8R317 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubqln1Q8R317 Gm27322-201ENSMUST00000184007 104 ntBASIC25.08■■□□□ 1.61
Ubqln1Q8R317 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.08■■□□□ 1.61
Ubqln1Q8R317 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Ubqln1Q8R317 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Ubqln1Q8R317 Gm26115-201ENSMUST00000175605 87 ntBASIC25.06■■□□□ 1.6
Ubqln1Q8R317 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubqln1Q8R317 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubqln1Q8R317 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubqln1Q8R317 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ubqln1Q8R317 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
Ubqln1Q8R317 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ubqln1Q8R317 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Ubqln1Q8R317 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ubqln1Q8R317 Gm8109-201ENSMUST00000194076 746 ntBASIC24.94■■□□□ 1.58
Ubqln1Q8R317 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ubqln1Q8R317 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ubqln1Q8R317 Mipep-204ENSMUST00000225043 1548 ntBASIC24.92■■□□□ 1.58
Ubqln1Q8R317 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ubqln1Q8R317 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ubqln1Q8R317 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.89■■□□□ 1.58
Ubqln1Q8R317 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.88■■□□□ 1.57
Ubqln1Q8R317 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ubqln1Q8R317 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ubqln1Q8R317 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.82■■□□□ 1.56
Ubqln1Q8R317 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ubqln1Q8R317 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ubqln1Q8R317 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ubqln1Q8R317 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ubqln1Q8R317 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.75■■□□□ 1.55
Ubqln1Q8R317 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ubqln1Q8R317 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms