Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm27325-201ENSMUST00000175467 74 ntBASIC25.51■■□□□ 1.67
Vps9d1Q8C190 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vps9d1Q8C190 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vps9d1Q8C190 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Vps9d1Q8C190 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Vps9d1Q8C190 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
Vps9d1Q8C190 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Vps9d1Q8C190 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.41■■□□□ 1.66
Vps9d1Q8C190 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Vps9d1Q8C190 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vps9d1Q8C190 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.37■■□□□ 1.65
Vps9d1Q8C190 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Vps9d1Q8C190 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Vps9d1Q8C190 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Vps9d1Q8C190 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.23■■□□□ 1.63
Vps9d1Q8C190 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Vps9d1Q8C190 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vps9d1Q8C190 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Vps9d1Q8C190 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Vps9d1Q8C190 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.13■■□□□ 1.61
Vps9d1Q8C190 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Vps9d1Q8C190 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vps9d1Q8C190 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Vps9d1Q8C190 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.1■■□□□ 1.61
Vps9d1Q8C190 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.08■■□□□ 1.61
Vps9d1Q8C190 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vps9d1Q8C190 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.05■■□□□ 1.6
Vps9d1Q8C190 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vps9d1Q8C190 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vps9d1Q8C190 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vps9d1Q8C190 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vps9d1Q8C190 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps9d1Q8C190 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Vps9d1Q8C190 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vps9d1Q8C190 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Vps9d1Q8C190 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vps9d1Q8C190 Gm25262-201ENSMUST00000174934 133 ntBASIC24.87■■□□□ 1.57
Vps9d1Q8C190 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Vps9d1Q8C190 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Vps9d1Q8C190 Rab21-202ENSMUST00000218831 843 ntBASIC24.85■■□□□ 1.57
Vps9d1Q8C190 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
Vps9d1Q8C190 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vps9d1Q8C190 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.84■■□□□ 1.57
Vps9d1Q8C190 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.79■■□□□ 1.56
Vps9d1Q8C190 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.77■■□□□ 1.56
Vps9d1Q8C190 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vps9d1Q8C190 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.73■■□□□ 1.55
Vps9d1Q8C190 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Vps9d1Q8C190 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vps9d1Q8C190 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vps9d1Q8C190 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Vps9d1Q8C190 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vps9d1Q8C190 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.62■■□□□ 1.53
Vps9d1Q8C190 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Vps9d1Q8C190 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vps9d1Q8C190 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vps9d1Q8C190 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Vps9d1Q8C190 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vps9d1Q8C190 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.51■■□□□ 1.51
Vps9d1Q8C190 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vps9d1Q8C190 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Vps9d1Q8C190 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.47■■□□□ 1.51
Vps9d1Q8C190 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.46■■□□□ 1.51
Vps9d1Q8C190 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.46■■□□□ 1.51
Vps9d1Q8C190 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.46■■□□□ 1.51
Vps9d1Q8C190 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.43■■□□□ 1.5
Vps9d1Q8C190 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Vps9d1Q8C190 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Vps9d1Q8C190 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vps9d1Q8C190 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Vps9d1Q8C190 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.39■■□□□ 1.49
Vps9d1Q8C190 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Vps9d1Q8C190 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Vps9d1Q8C190 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vps9d1Q8C190 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vps9d1Q8C190 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vps9d1Q8C190 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.35■■□□□ 1.49
Vps9d1Q8C190 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vps9d1Q8C190 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Vps9d1Q8C190 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Vps9d1Q8C190 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.33■■□□□ 1.49
Vps9d1Q8C190 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vps9d1Q8C190 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps9d1Q8C190 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps9d1Q8C190 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps9d1Q8C190 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vps9d1Q8C190 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps9d1Q8C190 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps9d1Q8C190 Gm26115-201ENSMUST00000175605 87 ntBASIC24.26■■□□□ 1.47
Vps9d1Q8C190 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Vps9d1Q8C190 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vps9d1Q8C190 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps9d1Q8C190 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vps9d1Q8C190 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms