Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm25262-201ENSMUST00000174934 133 ntBASIC32.11■■■□□ 2.73
Samm50Q8BGH2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Samm50Q8BGH2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Samm50Q8BGH2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Samm50Q8BGH2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.03■■■□□ 2.72
Samm50Q8BGH2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32■■■□□ 2.71
Samm50Q8BGH2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Samm50Q8BGH2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Samm50Q8BGH2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Samm50Q8BGH2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Samm50Q8BGH2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Samm50Q8BGH2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Samm50Q8BGH2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Samm50Q8BGH2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Samm50Q8BGH2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Samm50Q8BGH2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Samm50Q8BGH2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Samm50Q8BGH2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Samm50Q8BGH2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.65■■■□□ 2.66
Samm50Q8BGH2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Samm50Q8BGH2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Samm50Q8BGH2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Samm50Q8BGH2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Samm50Q8BGH2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Samm50Q8BGH2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Samm50Q8BGH2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.6■■■□□ 2.65
Samm50Q8BGH2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Samm50Q8BGH2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Samm50Q8BGH2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.52■■■□□ 2.64
Samm50Q8BGH2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.52■■■□□ 2.64
Samm50Q8BGH2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Samm50Q8BGH2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Samm50Q8BGH2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.44■■■□□ 2.62
Samm50Q8BGH2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.43■■■□□ 2.62
Samm50Q8BGH2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Samm50Q8BGH2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.42■■■□□ 2.62
Samm50Q8BGH2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Samm50Q8BGH2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Samm50Q8BGH2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Samm50Q8BGH2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Samm50Q8BGH2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Samm50Q8BGH2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.33■■■□□ 2.61
Samm50Q8BGH2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Samm50Q8BGH2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Samm50Q8BGH2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Samm50Q8BGH2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Samm50Q8BGH2 Gm26115-201ENSMUST00000175605 87 ntBASIC31.22■■■□□ 2.59
Samm50Q8BGH2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.22■■■□□ 2.59
Samm50Q8BGH2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Samm50Q8BGH2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Samm50Q8BGH2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Samm50Q8BGH2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.13■■■□□ 2.57
Samm50Q8BGH2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Samm50Q8BGH2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Samm50Q8BGH2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.08■■■□□ 2.57
Samm50Q8BGH2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Samm50Q8BGH2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Samm50Q8BGH2 Gm8109-201ENSMUST00000194076 746 ntBASIC31.06■■■□□ 2.56
Samm50Q8BGH2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Samm50Q8BGH2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Samm50Q8BGH2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Samm50Q8BGH2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Samm50Q8BGH2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Samm50Q8BGH2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Samm50Q8BGH2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.9■■■□□ 2.54
Samm50Q8BGH2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Samm50Q8BGH2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.89■■■□□ 2.54
Samm50Q8BGH2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Samm50Q8BGH2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.86■■■□□ 2.53
Samm50Q8BGH2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Samm50Q8BGH2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Samm50Q8BGH2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Samm50Q8BGH2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
Samm50Q8BGH2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Samm50Q8BGH2 Gm27322-201ENSMUST00000184007 104 ntBASIC30.75■■■□□ 2.51
Samm50Q8BGH2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Samm50Q8BGH2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Samm50Q8BGH2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
Samm50Q8BGH2 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.71■■■□□ 2.51
Samm50Q8BGH2 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.7■■■□□ 2.51
Samm50Q8BGH2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Samm50Q8BGH2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Samm50Q8BGH2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Samm50Q8BGH2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Samm50Q8BGH2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Samm50Q8BGH2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.6■■■□□ 2.49
Samm50Q8BGH2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Samm50Q8BGH2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Samm50Q8BGH2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Samm50Q8BGH2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Samm50Q8BGH2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Samm50Q8BGH2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Samm50Q8BGH2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.53■■■□□ 2.48
Samm50Q8BGH2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Samm50Q8BGH2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Samm50Q8BGH2 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.47■■■□□ 2.47
Samm50Q8BGH2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Samm50Q8BGH2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Samm50Q8BGH2 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.44■■■□□ 2.46
Samm50Q8BGH2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms