Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim6Q8BGE7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim6Q8BGE7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim6Q8BGE7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trim6Q8BGE7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.84■■■□□ 2.21
Trim6Q8BGE7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Trim6Q8BGE7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Trim6Q8BGE7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.8■■■□□ 2.2
Trim6Q8BGE7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
Trim6Q8BGE7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim6Q8BGE7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Trim6Q8BGE7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.66■■■□□ 2.18
Trim6Q8BGE7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim6Q8BGE7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim6Q8BGE7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim6Q8BGE7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim6Q8BGE7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim6Q8BGE7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Trim6Q8BGE7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trim6Q8BGE7 Gm25238-201ENSMUST00000174914 89 ntBASIC28.55■■■□□ 2.16
Trim6Q8BGE7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trim6Q8BGE7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim6Q8BGE7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.49■■■□□ 2.15
Trim6Q8BGE7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.48■■■□□ 2.15
Trim6Q8BGE7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim6Q8BGE7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.43■■■□□ 2.14
Trim6Q8BGE7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim6Q8BGE7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim6Q8BGE7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.41■■■□□ 2.14
Trim6Q8BGE7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Trim6Q8BGE7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trim6Q8BGE7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.33■■■□□ 2.13
Trim6Q8BGE7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Trim6Q8BGE7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim6Q8BGE7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim6Q8BGE7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim6Q8BGE7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trim6Q8BGE7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.14■■■□□ 2.1
Trim6Q8BGE7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
Trim6Q8BGE7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim6Q8BGE7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim6Q8BGE7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
Trim6Q8BGE7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim6Q8BGE7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.06■■■□□ 2.08
Trim6Q8BGE7 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.03■■■□□ 2.08
Trim6Q8BGE7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Trim6Q8BGE7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim6Q8BGE7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim6Q8BGE7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.88■■■□□ 2.05
Trim6Q8BGE7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trim6Q8BGE7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trim6Q8BGE7 Zxda-201ENSMUST00000117281 2621 ntBASIC27.86■■■□□ 2.05
Trim6Q8BGE7 Rab21-202ENSMUST00000218831 843 ntBASIC27.83■■■□□ 2.05
Trim6Q8BGE7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Trim6Q8BGE7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Trim6Q8BGE7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Trim6Q8BGE7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Trim6Q8BGE7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim6Q8BGE7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim6Q8BGE7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim6Q8BGE7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim6Q8BGE7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim6Q8BGE7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Trim6Q8BGE7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.71■■■□□ 2.03
Trim6Q8BGE7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Trim6Q8BGE7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.7■■■□□ 2.02
Trim6Q8BGE7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim6Q8BGE7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Trim6Q8BGE7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Trim6Q8BGE7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trim6Q8BGE7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Trim6Q8BGE7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.62■■■□□ 2.01
Trim6Q8BGE7 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.61■■■□□ 2.01
Trim6Q8BGE7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Trim6Q8BGE7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Trim6Q8BGE7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.56■■■□□ 2
Trim6Q8BGE7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim6Q8BGE7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
Trim6Q8BGE7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.53■■■□□ 2
Trim6Q8BGE7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Trim6Q8BGE7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trim6Q8BGE7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.48■■□□□ 1.99
Trim6Q8BGE7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Trim6Q8BGE7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms