Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim50Q810I2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.95■■□□□ 1.9
Trim50Q810I2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Trim50Q810I2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Trim50Q810I2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim50Q810I2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim50Q810I2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim50Q810I2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Trim50Q810I2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim50Q810I2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.75■■□□□ 1.87
Trim50Q810I2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim50Q810I2 Gm25262-201ENSMUST00000174934 133 ntBASIC26.71■■□□□ 1.87
Trim50Q810I2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
Trim50Q810I2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim50Q810I2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim50Q810I2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.62■■□□□ 1.85
Trim50Q810I2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim50Q810I2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim50Q810I2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim50Q810I2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim50Q810I2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Trim50Q810I2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim50Q810I2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim50Q810I2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim50Q810I2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim50Q810I2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim50Q810I2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim50Q810I2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim50Q810I2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim50Q810I2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim50Q810I2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim50Q810I2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.41■■□□□ 1.82
Trim50Q810I2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim50Q810I2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Trim50Q810I2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim50Q810I2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.36■■□□□ 1.81
Trim50Q810I2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim50Q810I2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim50Q810I2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim50Q810I2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.24■■□□□ 1.79
Trim50Q810I2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim50Q810I2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim50Q810I2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim50Q810I2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim50Q810I2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.17■■□□□ 1.78
Trim50Q810I2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.17■■□□□ 1.78
Trim50Q810I2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim50Q810I2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim50Q810I2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.11■■□□□ 1.77
Trim50Q810I2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim50Q810I2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim50Q810I2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Trim50Q810I2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim50Q810I2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim50Q810I2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim50Q810I2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim50Q810I2 AL845457.1-201ENSMUST00000197244 68 ntBASIC26■■□□□ 1.75
Trim50Q810I2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.98■■□□□ 1.75
Trim50Q810I2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim50Q810I2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim50Q810I2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim50Q810I2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trim50Q810I2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim50Q810I2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Trim50Q810I2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Trim50Q810I2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim50Q810I2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Trim50Q810I2 Gm26115-201ENSMUST00000175605 87 ntBASIC25.85■■□□□ 1.73
Trim50Q810I2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Trim50Q810I2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trim50Q810I2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Trim50Q810I2 Gm27322-201ENSMUST00000184007 104 ntBASIC25.84■■□□□ 1.73
Trim50Q810I2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.82■■□□□ 1.72
Trim50Q810I2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
Trim50Q810I2 Gm8109-201ENSMUST00000194076 746 ntBASIC25.8■■□□□ 1.72
Trim50Q810I2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trim50Q810I2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim50Q810I2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.72
Trim50Q810I2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim50Q810I2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.72■■□□□ 1.71
Trim50Q810I2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim50Q810I2 Mipep-204ENSMUST00000225043 1548 ntBASIC25.7■■□□□ 1.7
Trim50Q810I2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Trim50Q810I2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim50Q810I2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim50Q810I2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim50Q810I2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.65■■□□□ 1.7
Trim50Q810I2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim50Q810I2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim50Q810I2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.62■■□□□ 1.69
Trim50Q810I2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim50Q810I2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Trim50Q810I2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim50Q810I2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.53■■□□□ 1.68
Trim50Q810I2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Trim50Q810I2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim50Q810I2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms