Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Gm25262-201ENSMUST00000174934 133 ntBASIC32.45■■■□□ 2.79
Casc1Q6TDU8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Casc1Q6TDU8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.44■■■□□ 2.78
Casc1Q6TDU8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC32.42■■■□□ 2.78
Casc1Q6TDU8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Casc1Q6TDU8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Casc1Q6TDU8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Casc1Q6TDU8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Casc1Q6TDU8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Casc1Q6TDU8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Casc1Q6TDU8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Casc1Q6TDU8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.14■■■□□ 2.74
Casc1Q6TDU8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Casc1Q6TDU8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Casc1Q6TDU8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.11■■■□□ 2.73
Casc1Q6TDU8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Casc1Q6TDU8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Casc1Q6TDU8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Casc1Q6TDU8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Casc1Q6TDU8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Casc1Q6TDU8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Casc1Q6TDU8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Casc1Q6TDU8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.9■■■□□ 2.7
Casc1Q6TDU8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Casc1Q6TDU8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Casc1Q6TDU8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Casc1Q6TDU8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Casc1Q6TDU8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Casc1Q6TDU8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Casc1Q6TDU8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.8■■■□□ 2.68
Casc1Q6TDU8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.79■■■□□ 2.68
Casc1Q6TDU8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Casc1Q6TDU8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.76■■■□□ 2.67
Casc1Q6TDU8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Casc1Q6TDU8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
Casc1Q6TDU8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.71■■■□□ 2.67
Casc1Q6TDU8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Casc1Q6TDU8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.69■■■□□ 2.66
Casc1Q6TDU8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Casc1Q6TDU8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Casc1Q6TDU8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Casc1Q6TDU8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Casc1Q6TDU8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.6■■■□□ 2.65
Casc1Q6TDU8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
Casc1Q6TDU8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Casc1Q6TDU8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Casc1Q6TDU8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Casc1Q6TDU8 Gm26115-201ENSMUST00000175605 87 ntBASIC31.52■■■□□ 2.64
Casc1Q6TDU8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Casc1Q6TDU8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Casc1Q6TDU8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Casc1Q6TDU8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Casc1Q6TDU8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Casc1Q6TDU8 Gm8109-201ENSMUST00000194076 746 ntBASIC31.4■■■□□ 2.62
Casc1Q6TDU8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Casc1Q6TDU8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Casc1Q6TDU8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.32■■■□□ 2.6
Casc1Q6TDU8 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.3■■■□□ 2.6
Casc1Q6TDU8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Casc1Q6TDU8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
Casc1Q6TDU8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Casc1Q6TDU8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.24■■■□□ 2.59
Casc1Q6TDU8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Casc1Q6TDU8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Casc1Q6TDU8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Casc1Q6TDU8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Casc1Q6TDU8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Casc1Q6TDU8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Casc1Q6TDU8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Casc1Q6TDU8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Casc1Q6TDU8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Casc1Q6TDU8 Gm27322-201ENSMUST00000184007 104 ntBASIC31.1■■■□□ 2.57
Casc1Q6TDU8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Casc1Q6TDU8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Casc1Q6TDU8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Casc1Q6TDU8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Casc1Q6TDU8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.04■■■□□ 2.56
Casc1Q6TDU8 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.04■■■□□ 2.56
Casc1Q6TDU8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Casc1Q6TDU8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.03■■■□□ 2.56
Casc1Q6TDU8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Casc1Q6TDU8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Casc1Q6TDU8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.98■■■□□ 2.55
Casc1Q6TDU8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Casc1Q6TDU8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Casc1Q6TDU8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.92■■■□□ 2.54
Casc1Q6TDU8 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.91■■■□□ 2.54
Casc1Q6TDU8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Casc1Q6TDU8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Casc1Q6TDU8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Casc1Q6TDU8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Casc1Q6TDU8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Casc1Q6TDU8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Casc1Q6TDU8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Casc1Q6TDU8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.75■■■□□ 2.51
Casc1Q6TDU8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Casc1Q6TDU8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.72■■■□□ 2.51
Casc1Q6TDU8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.71■■■□□ 2.51
Casc1Q6TDU8 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.67■■■□□ 2.5
Casc1Q6TDU8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms