Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.56■■■□□ 2.48
Abcf1Q6P542 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abcf1Q6P542 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.53■■■□□ 2.48
Abcf1Q6P542 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.53■■■□□ 2.48
Abcf1Q6P542 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Abcf1Q6P542 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.5■■■□□ 2.47
Abcf1Q6P542 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Abcf1Q6P542 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abcf1Q6P542 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Abcf1Q6P542 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Abcf1Q6P542 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
Abcf1Q6P542 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Abcf1Q6P542 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Abcf1Q6P542 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
Abcf1Q6P542 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Abcf1Q6P542 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Abcf1Q6P542 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Abcf1Q6P542 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Abcf1Q6P542 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Abcf1Q6P542 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Abcf1Q6P542 Rab21-202ENSMUST00000218831 843 ntBASIC30.13■■■□□ 2.41
Abcf1Q6P542 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Abcf1Q6P542 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Abcf1Q6P542 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Abcf1Q6P542 Gm25262-201ENSMUST00000174934 133 ntBASIC30.08■■■□□ 2.41
Abcf1Q6P542 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Abcf1Q6P542 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Abcf1Q6P542 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.03■■■□□ 2.4
Abcf1Q6P542 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.03■■■□□ 2.4
Abcf1Q6P542 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30■■■□□ 2.39
Abcf1Q6P542 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Abcf1Q6P542 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Abcf1Q6P542 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.91■■■□□ 2.38
Abcf1Q6P542 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Abcf1Q6P542 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Abcf1Q6P542 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Abcf1Q6P542 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.84■■■□□ 2.37
Abcf1Q6P542 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Abcf1Q6P542 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Abcf1Q6P542 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Abcf1Q6P542 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.76■■■□□ 2.35
Abcf1Q6P542 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Abcf1Q6P542 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Abcf1Q6P542 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Abcf1Q6P542 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Abcf1Q6P542 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
Abcf1Q6P542 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Abcf1Q6P542 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Abcf1Q6P542 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Abcf1Q6P542 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.61■■■□□ 2.33
Abcf1Q6P542 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Abcf1Q6P542 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.6■■■□□ 2.33
Abcf1Q6P542 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.56■■■□□ 2.32
Abcf1Q6P542 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.56■■■□□ 2.32
Abcf1Q6P542 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.54■■■□□ 2.32
Abcf1Q6P542 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Abcf1Q6P542 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Abcf1Q6P542 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.5■■■□□ 2.31
Abcf1Q6P542 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abcf1Q6P542 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Abcf1Q6P542 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Abcf1Q6P542 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.46■■■□□ 2.31
Abcf1Q6P542 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Abcf1Q6P542 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Abcf1Q6P542 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.43■■■□□ 2.3
Abcf1Q6P542 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Abcf1Q6P542 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Abcf1Q6P542 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Abcf1Q6P542 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Abcf1Q6P542 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Abcf1Q6P542 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.36■■■□□ 2.29
Abcf1Q6P542 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Abcf1Q6P542 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.34■■■□□ 2.29
Abcf1Q6P542 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Abcf1Q6P542 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
Abcf1Q6P542 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.33■■■□□ 2.29
Abcf1Q6P542 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Abcf1Q6P542 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
Abcf1Q6P542 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.26■■■□□ 2.27
Abcf1Q6P542 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Abcf1Q6P542 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.25■■■□□ 2.27
Abcf1Q6P542 Gm26115-201ENSMUST00000175605 87 ntBASIC29.23■■■□□ 2.27
Abcf1Q6P542 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Abcf1Q6P542 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Abcf1Q6P542 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Abcf1Q6P542 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Abcf1Q6P542 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Abcf1Q6P542 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Abcf1Q6P542 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Abcf1Q6P542 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Abcf1Q6P542 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Abcf1Q6P542 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Abcf1Q6P542 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Abcf1Q6P542 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Abcf1Q6P542 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Abcf1Q6P542 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Abcf1Q6P542 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
Abcf1Q6P542 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Abcf1Q6P542 Gm8109-201ENSMUST00000194076 746 ntBASIC29.05■■■□□ 2.24
Abcf1Q6P542 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms