Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rab21-202ENSMUST00000218831 843 ntBASIC33■■■□□ 2.87
Rnf20Q5DTM8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Rnf20Q5DTM8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Rnf20Q5DTM8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.94■■■□□ 2.86
Rnf20Q5DTM8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Rnf20Q5DTM8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
Rnf20Q5DTM8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Rnf20Q5DTM8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Rnf20Q5DTM8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Rnf20Q5DTM8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.8■■■□□ 2.84
Rnf20Q5DTM8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Rnf20Q5DTM8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Rnf20Q5DTM8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rnf20Q5DTM8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Rnf20Q5DTM8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rnf20Q5DTM8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
Rnf20Q5DTM8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Rnf20Q5DTM8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Rnf20Q5DTM8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Rnf20Q5DTM8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.54■■■□□ 2.8
Rnf20Q5DTM8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.52■■■□□ 2.8
Rnf20Q5DTM8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.49■■■□□ 2.79
Rnf20Q5DTM8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rnf20Q5DTM8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.45■■■□□ 2.79
Rnf20Q5DTM8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rnf20Q5DTM8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rnf20Q5DTM8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rnf20Q5DTM8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rnf20Q5DTM8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Rnf20Q5DTM8 Gm25262-201ENSMUST00000174934 133 ntBASIC32.39■■■□□ 2.78
Rnf20Q5DTM8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rnf20Q5DTM8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rnf20Q5DTM8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rnf20Q5DTM8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.35■■■□□ 2.77
Rnf20Q5DTM8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Rnf20Q5DTM8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Rnf20Q5DTM8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rnf20Q5DTM8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rnf20Q5DTM8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rnf20Q5DTM8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rnf20Q5DTM8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rnf20Q5DTM8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rnf20Q5DTM8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.1■■■□□ 2.73
Rnf20Q5DTM8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Rnf20Q5DTM8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Rnf20Q5DTM8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rnf20Q5DTM8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rnf20Q5DTM8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Rnf20Q5DTM8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rnf20Q5DTM8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Rnf20Q5DTM8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Rnf20Q5DTM8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Rnf20Q5DTM8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Rnf20Q5DTM8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rnf20Q5DTM8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rnf20Q5DTM8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Rnf20Q5DTM8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Rnf20Q5DTM8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Rnf20Q5DTM8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.81■■■□□ 2.68
Rnf20Q5DTM8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.8■■■□□ 2.68
Rnf20Q5DTM8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.77■■■□□ 2.68
Rnf20Q5DTM8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.77■■■□□ 2.68
Rnf20Q5DTM8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Rnf20Q5DTM8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Rnf20Q5DTM8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rnf20Q5DTM8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rnf20Q5DTM8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Rnf20Q5DTM8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rnf20Q5DTM8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rnf20Q5DTM8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rnf20Q5DTM8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
Rnf20Q5DTM8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rnf20Q5DTM8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.61■■■□□ 2.65
Rnf20Q5DTM8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Rnf20Q5DTM8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rnf20Q5DTM8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rnf20Q5DTM8 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.54■■■□□ 2.64
Rnf20Q5DTM8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Rnf20Q5DTM8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rnf20Q5DTM8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rnf20Q5DTM8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rnf20Q5DTM8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.52■■■□□ 2.64
Rnf20Q5DTM8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rnf20Q5DTM8 Mipep-204ENSMUST00000225043 1548 ntBASIC31.5■■■□□ 2.63
Rnf20Q5DTM8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Rnf20Q5DTM8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Rnf20Q5DTM8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Rnf20Q5DTM8 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.46■■■□□ 2.63
Rnf20Q5DTM8 Gm27322-201ENSMUST00000184007 104 ntBASIC31.46■■■□□ 2.63
Rnf20Q5DTM8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Rnf20Q5DTM8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.42■■■□□ 2.62
Rnf20Q5DTM8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.4■■■□□ 2.62
Rnf20Q5DTM8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Rnf20Q5DTM8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rnf20Q5DTM8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rnf20Q5DTM8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.33■■■□□ 2.61
Rnf20Q5DTM8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.29■■■□□ 2.6
Rnf20Q5DTM8 Gm26115-201ENSMUST00000175605 87 ntBASIC31.29■■■□□ 2.6
Rnf20Q5DTM8 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.29■■■□□ 2.6
Rnf20Q5DTM8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms