Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim9Q3V0X1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smim9Q3V0X1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smim9Q3V0X1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smim9Q3V0X1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim9Q3V0X1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smim9Q3V0X1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim9Q3V0X1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim9Q3V0X1 Gm23366-201ENSMUST00000175022 89 ntBASIC20.77■□□□□ 0.92
Smim9Q3V0X1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim9Q3V0X1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.76■□□□□ 0.91
Smim9Q3V0X1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Smim9Q3V0X1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.73■□□□□ 0.91
Smim9Q3V0X1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smim9Q3V0X1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim9Q3V0X1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smim9Q3V0X1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smim9Q3V0X1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smim9Q3V0X1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smim9Q3V0X1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim9Q3V0X1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Smim9Q3V0X1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smim9Q3V0X1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Smim9Q3V0X1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smim9Q3V0X1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smim9Q3V0X1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smim9Q3V0X1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smim9Q3V0X1 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.51■□□□□ 0.87
Smim9Q3V0X1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smim9Q3V0X1 Zxda-201ENSMUST00000117281 2621 ntBASIC20.5■□□□□ 0.87
Smim9Q3V0X1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smim9Q3V0X1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim9Q3V0X1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.46■□□□□ 0.87
Smim9Q3V0X1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smim9Q3V0X1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smim9Q3V0X1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smim9Q3V0X1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smim9Q3V0X1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.4■□□□□ 0.86
Smim9Q3V0X1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smim9Q3V0X1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smim9Q3V0X1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim9Q3V0X1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim9Q3V0X1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smim9Q3V0X1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smim9Q3V0X1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.37■□□□□ 0.85
Smim9Q3V0X1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
Smim9Q3V0X1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smim9Q3V0X1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.32■□□□□ 0.84
Smim9Q3V0X1 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.26■□□□□ 0.83
Smim9Q3V0X1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smim9Q3V0X1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim9Q3V0X1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smim9Q3V0X1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim9Q3V0X1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smim9Q3V0X1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim9Q3V0X1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim9Q3V0X1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim9Q3V0X1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim9Q3V0X1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim9Q3V0X1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim9Q3V0X1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim9Q3V0X1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim9Q3V0X1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.13■□□□□ 0.81
Smim9Q3V0X1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim9Q3V0X1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim9Q3V0X1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim9Q3V0X1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim9Q3V0X1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim9Q3V0X1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim9Q3V0X1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smim9Q3V0X1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smim9Q3V0X1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smim9Q3V0X1 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.07■□□□□ 0.8
Smim9Q3V0X1 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.07■□□□□ 0.8
Smim9Q3V0X1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim9Q3V0X1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smim9Q3V0X1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim9Q3V0X1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim9Q3V0X1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim9Q3V0X1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smim9Q3V0X1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smim9Q3V0X1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim9Q3V0X1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim9Q3V0X1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim9Q3V0X1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smim9Q3V0X1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim9Q3V0X1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim9Q3V0X1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim9Q3V0X1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim9Q3V0X1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim9Q3V0X1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim9Q3V0X1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Smim9Q3V0X1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smim9Q3V0X1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim9Q3V0X1 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.95■□□□□ 0.78
Smim9Q3V0X1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim9Q3V0X1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smim9Q3V0X1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim9Q3V0X1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smim9Q3V0X1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms