Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Nhej1Q3KNJ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Nhej1Q3KNJ2 Gm25238-201ENSMUST00000174914 89 ntBASIC29.28■■■□□ 2.28
Nhej1Q3KNJ2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Nhej1Q3KNJ2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Nhej1Q3KNJ2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Nhej1Q3KNJ2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Nhej1Q3KNJ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.19■■■□□ 2.26
Nhej1Q3KNJ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.16■■■□□ 2.26
Nhej1Q3KNJ2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.15■■■□□ 2.26
Nhej1Q3KNJ2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.14■■■□□ 2.26
Nhej1Q3KNJ2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Nhej1Q3KNJ2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Nhej1Q3KNJ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.07■■■□□ 2.24
Nhej1Q3KNJ2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.04■■■□□ 2.24
Nhej1Q3KNJ2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Nhej1Q3KNJ2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Nhej1Q3KNJ2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Nhej1Q3KNJ2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Nhej1Q3KNJ2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Nhej1Q3KNJ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Nhej1Q3KNJ2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Nhej1Q3KNJ2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Nhej1Q3KNJ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.84■■■□□ 2.21
Nhej1Q3KNJ2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.83■■■□□ 2.2
Nhej1Q3KNJ2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Nhej1Q3KNJ2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Nhej1Q3KNJ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
Nhej1Q3KNJ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Nhej1Q3KNJ2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Nhej1Q3KNJ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.74■■■□□ 2.19
Nhej1Q3KNJ2 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.73■■■□□ 2.19
Nhej1Q3KNJ2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Nhej1Q3KNJ2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Nhej1Q3KNJ2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Nhej1Q3KNJ2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Nhej1Q3KNJ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.58■■■□□ 2.17
Nhej1Q3KNJ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
Nhej1Q3KNJ2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Nhej1Q3KNJ2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Nhej1Q3KNJ2 Rab21-202ENSMUST00000218831 843 ntBASIC28.51■■■□□ 2.15
Nhej1Q3KNJ2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
Nhej1Q3KNJ2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Nhej1Q3KNJ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Nhej1Q3KNJ2 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.48■■■□□ 2.15
Nhej1Q3KNJ2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Nhej1Q3KNJ2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Nhej1Q3KNJ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Nhej1Q3KNJ2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Nhej1Q3KNJ2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.42■■■□□ 2.14
Nhej1Q3KNJ2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.42■■■□□ 2.14
Nhej1Q3KNJ2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Nhej1Q3KNJ2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Nhej1Q3KNJ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.38■■■□□ 2.13
Nhej1Q3KNJ2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Nhej1Q3KNJ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.35■■■□□ 2.13
Nhej1Q3KNJ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Nhej1Q3KNJ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Nhej1Q3KNJ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.29■■■□□ 2.12
Nhej1Q3KNJ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Nhej1Q3KNJ2 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.28■■■□□ 2.12
Nhej1Q3KNJ2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Nhej1Q3KNJ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Nhej1Q3KNJ2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Nhej1Q3KNJ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Nhej1Q3KNJ2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Nhej1Q3KNJ2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.22■■■□□ 2.11
Nhej1Q3KNJ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Nhej1Q3KNJ2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Nhej1Q3KNJ2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Nhej1Q3KNJ2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Nhej1Q3KNJ2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.15■■■□□ 2.1
Nhej1Q3KNJ2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Nhej1Q3KNJ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.15■■■□□ 2.1
Nhej1Q3KNJ2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Nhej1Q3KNJ2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Nhej1Q3KNJ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Nhej1Q3KNJ2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Nhej1Q3KNJ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
Nhej1Q3KNJ2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Nhej1Q3KNJ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Nhej1Q3KNJ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Nhej1Q3KNJ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.06■■■□□ 2.08
Nhej1Q3KNJ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Nhej1Q3KNJ2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Nhej1Q3KNJ2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Nhej1Q3KNJ2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Nhej1Q3KNJ2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Nhej1Q3KNJ2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Nhej1Q3KNJ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Nhej1Q3KNJ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Nhej1Q3KNJ2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Nhej1Q3KNJ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Nhej1Q3KNJ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Nhej1Q3KNJ2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Nhej1Q3KNJ2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Nhej1Q3KNJ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Nhej1Q3KNJ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.88■■■□□ 2.05
Nhej1Q3KNJ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Nhej1Q3KNJ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.84■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms