Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.45■■□□□ 1.18
Tnfsf8P32972 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Tnfsf8P32972 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfsf8P32972 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.41■■□□□ 1.18
Tnfsf8P32972 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfsf8P32972 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfsf8P32972 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.38■■□□□ 1.17
Tnfsf8P32972 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Tnfsf8P32972 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfsf8P32972 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfsf8P32972 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Tnfsf8P32972 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnfsf8P32972 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.27■■□□□ 1.16
Tnfsf8P32972 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tnfsf8P32972 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfsf8P32972 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfsf8P32972 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tnfsf8P32972 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.13■■□□□ 1.13
Tnfsf8P32972 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.12■■□□□ 1.13
Tnfsf8P32972 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tnfsf8P32972 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Tnfsf8P32972 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tnfsf8P32972 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnfsf8P32972 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnfsf8P32972 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Tnfsf8P32972 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnfsf8P32972 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.05■■□□□ 1.12
Tnfsf8P32972 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tnfsf8P32972 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tnfsf8P32972 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.03■■□□□ 1.12
Tnfsf8P32972 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfsf8P32972 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfsf8P32972 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tnfsf8P32972 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfsf8P32972 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Tnfsf8P32972 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tnfsf8P32972 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.92■■□□□ 1.1
Tnfsf8P32972 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.88■■□□□ 1.09
Tnfsf8P32972 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfsf8P32972 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.85■■□□□ 1.09
Tnfsf8P32972 Rab21-202ENSMUST00000218831 843 ntBASIC21.84■■□□□ 1.09
Tnfsf8P32972 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfsf8P32972 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfsf8P32972 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfsf8P32972 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfsf8P32972 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfsf8P32972 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfsf8P32972 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfsf8P32972 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfsf8P32972 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfsf8P32972 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tnfsf8P32972 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
Tnfsf8P32972 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfsf8P32972 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.72■■□□□ 1.07
Tnfsf8P32972 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.7■■□□□ 1.06
Tnfsf8P32972 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfsf8P32972 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.7■■□□□ 1.06
Tnfsf8P32972 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfsf8P32972 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfsf8P32972 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.68■■□□□ 1.06
Tnfsf8P32972 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfsf8P32972 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfsf8P32972 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tnfsf8P32972 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfsf8P32972 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Tnfsf8P32972 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Tnfsf8P32972 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tnfsf8P32972 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfsf8P32972 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.63■■□□□ 1.05
Tnfsf8P32972 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfsf8P32972 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfsf8P32972 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfsf8P32972 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.55■■□□□ 1.04
Tnfsf8P32972 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.55■■□□□ 1.04
Tnfsf8P32972 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfsf8P32972 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfsf8P32972 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfsf8P32972 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tnfsf8P32972 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.53■■□□□ 1.04
Tnfsf8P32972 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Tnfsf8P32972 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfsf8P32972 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfsf8P32972 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfsf8P32972 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfsf8P32972 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnfsf8P32972 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfsf8P32972 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfsf8P32972 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfsf8P32972 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Tnfsf8P32972 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfsf8P32972 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfsf8P32972 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfsf8P32972 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfsf8P32972 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfsf8P32972 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfsf8P32972 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfsf8P32972 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfsf8P32972 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfsf8P32972 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfsf8P32972 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms