Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm10139O88245 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.86■□□□□ 0.29
Gm10139O88245 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gm10139O88245 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm10139O88245 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm10139O88245 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm10139O88245 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm10139O88245 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Gm10139O88245 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm10139O88245 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm10139O88245 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm10139O88245 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm10139O88245 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm10139O88245 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm10139O88245 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.71■□□□□ 0.27
Gm10139O88245 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm10139O88245 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm10139O88245 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm10139O88245 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm10139O88245 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Gm10139O88245 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm10139O88245 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm10139O88245 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm10139O88245 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm10139O88245 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10139O88245 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm10139O88245 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm10139O88245 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm10139O88245 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.55■□□□□ 0.24
Gm10139O88245 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Gm10139O88245 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10139O88245 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10139O88245 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.52■□□□□ 0.24
Gm10139O88245 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm10139O88245 Rab21-202ENSMUST00000218831 843 ntBASIC16.48■□□□□ 0.23
Gm10139O88245 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10139O88245 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10139O88245 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10139O88245 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10139O88245 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10139O88245 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm10139O88245 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10139O88245 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10139O88245 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10139O88245 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10139O88245 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm10139O88245 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10139O88245 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10139O88245 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.36■□□□□ 0.21
Gm10139O88245 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10139O88245 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.36■□□□□ 0.21
Gm10139O88245 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10139O88245 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10139O88245 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10139O88245 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10139O88245 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm10139O88245 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm10139O88245 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10139O88245 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm10139O88245 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm10139O88245 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10139O88245 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm10139O88245 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm10139O88245 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.26■□□□□ 0.19
Gm10139O88245 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10139O88245 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10139O88245 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Gm10139O88245 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10139O88245 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm10139O88245 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10139O88245 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10139O88245 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10139O88245 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm10139O88245 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm10139O88245 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm10139O88245 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm10139O88245 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10139O88245 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm10139O88245 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10139O88245 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10139O88245 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10139O88245 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10139O88245 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm10139O88245 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10139O88245 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.12■□□□□ 0.17
Gm10139O88245 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10139O88245 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm10139O88245 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm10139O88245 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm10139O88245 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm10139O88245 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10139O88245 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.07■□□□□ 0.16
Gm10139O88245 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10139O88245 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm10139O88245 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm10139O88245 Mipep-204ENSMUST00000225043 1548 ntBASIC16.04■□□□□ 0.16
Gm10139O88245 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.03■□□□□ 0.16
Gm10139O88245 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm10139O88245 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm10139O88245 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms